FC923454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_ASHGO (Putative DNA helicase INO80 OS=Ashbya gossypii GN=INO80 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.837e-19 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAE 534 + G+HR+LI+ Q +D+IE L K ++RLDGS + E R D+V + + I SADT++F + DWNP D QAMDRAHRLGQ K V V+RL+++GT+EE++ + K + V+ + Sbjct: 1252 LKAGEHRVLIYFQMTRMMDLIEEYLTYRQYK---HIRLDGSSKLEDRRDLVHDWQTKSDIFIFLLSTRAGGLGINLTSADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLLIKGTIEERMRDRAKQKEHVQQVVMEGK 1391
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_CANGA (Putative DNA helicase INO80 OS=Candida glabrata GN=INO80 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.399e-19 Identity = 52/147 (35.37%), Postives = 79/147 (53.74%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNT 561 HR+LI+ Q +D++E L + ++RLDGS + E R D+V + ++P I +ADT++F + DWNP D QAMDRAHRLGQ K V V+RL++RGT+EE++ + K + V+ + T Sbjct: 1312 HRVLIYFQMTKMMDLMEEYLTY---RQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTKQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTKDTNIQTT 1455
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_YARLI (Helicase SWR1 OS=Yarrowia lipolytica GN=SWR1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.093e-19 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 115 GQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVI 525 G HR LIF Q LD++E+ L ++ + Y+RLDG+ + E+R + + FN+DP I ADT++F + DWNP D Q DR HR+GQ + VH++R + T+E ++ K + N VI Sbjct: 1484 GGHRALIFTQMTKVLDVLEQFL---NIHGLRYMRLDGATKIEQRQLLTERFNTDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPSMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKQILDNVVI 1617
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_CANGA (Helicase SWR1 OS=Candida glabrata GN=SWR1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.093e-19 Identity = 52/158 (32.91%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 115 GQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFAS 588 G HR LIF Q LDI+E+ L + Y+RLDG+ + E R + + FNSDP I ADT++F + DWNP D Q DR HR+GQ + VH++R + T+E ++ K + + +I + + + DLF S Sbjct: 1193 GGHRALIFTQMTKVLDILEQFL---NYHGYLYMRLDGATKIEDRQILTERFNSDPKITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDDVIIQKGEFTTDYFSKLSVKDLFGS 1347
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: RHP26_SCHPO (DNA repair protein rhp26 OS=Schizosaccharomyces pombe GN=rhp26 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19 Identity = 57/163 (34.97%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAETPXKG 609 HR L+F+Q + LDI+E L + V Y R+DGS R D+V FN + D AD ++ + DWNP D QA +RA RLGQKK V V+RL+ GT+EEK+ Q FK + N ++ + + L DLF + +G Sbjct: 642 HRTLLFSQTRQMLDILEIGL--KDLPDVHYCRMDGSTSIALRQDLVDNFNKNEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRRFFKMTDLHDLFTLGDNKTEG 801
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_ASHGO (Helicase SWR1 OS=Ashbya gossypii GN=SWR1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 53/159 (33.33%), Postives = 76/159 (47.80%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAET 597 HR LIF Q LDI+E+ L + Y+RLDG+ + E R + + FN+DP I ADT++F + DWNP D Q DR HR+GQ + VH++R T+E ++ K + N VI + + + DL S ET Sbjct: 1234 HRALIFTQMTKVLDILEQFL---NYHGYLYMRLDGATKIEDRQILTERFNTDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFASEHTIESNILKKANQKRQLDNIVIQKGEFTTDYFSRLSVKDLLGSDET 1389
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_LODEL (Putative DNA helicase ino80 OS=Lodderomyces elongisporus GN=INO80 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 62/177 (35.03%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDL-FQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINA---------ENASMKTMNTGQLLDLFASAETPXKGGGVS 621 HR+LI+ Q +D++E L F+ H Y+RLDGS + + R D+V + + P I +ADT+VF + DWNP D QAMDRAHRLGQ + V V+RL+ R T+EE++ + K + V+ E+A+ K + LL L S + G GV+ Sbjct: 1328 HRVLIYFQMTKMMDLMEEYLTFKQHK----YIRLDGSSKLDDRRDLVHDWQTKPEIFVFLLSTRAGGLGINLTAADTVVFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLTRNTIEERMRDRAKQKEQVQQVVMEGKATTIMSKKEDAASKKKDVAFLL-LGGSGDGDGDGTGVN 1499
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_KLULA (Putative DNA helicase INO80 OS=Kluyveromyces lactis GN=INO80 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAE 534 HR+LI+ Q +D++E L + T++RLDGS + + R D+V + + P I +ADT++F + DWNP D QAMDRAHRLGQ + V V+RL++RGT+EE++ + K + V+ + Sbjct: 1336 HRVLIYFQMTKMMDLMEEYLTY---RQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGK 1470
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: INO80_ARATH (DNA helicase INO80 complex homolog 1 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18 Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTV 522 + G HR+L+FAQ L+I+E + + + YLRLDGS R D+V+ F I +ADT++F E DWNP D QAMDRAHRLGQ K V V+RLI + T+EEK++ + S NTV Sbjct: 1218 LRAGNHRVLLFAQMTKMLNILEDYM---NYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKIL----HRASQKNTV 1349
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_NEUCR (Helicase swr-1 OS=Neurospora crassa GN=swr-1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 53/161 (32.92%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFAS 588 + G HR LIF Q LDI+E+ L ++ YLRLDG+ + E+R + FN DP I ADT++F + DWNP D Q DR HR+GQ + VH++RL+ T+E ++ K + + VI + N + D+ S Sbjct: 1518 LQAGGHRALIFTQMTKVLDILEQFL---NIHGHKYLRLDGATKVEQRQILTDRFNHDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVIQEGEFTTDYFNRLSVRDVLGS 1675 The following BLAST results are available for this feature:
BLAST of FC923454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923454 ID=FC923454; Name=FC923454; organism=Citrus clementina; type=EST; length=635bpback to top |