FC923454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_KLULA (Helicase SWR1 OS=Kluyveromyces lactis GN=SWR1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 54/160 (33.75%), Postives = 77/160 (48.12%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAETP 600 HR LIF Q LDI+E+ L + Y+RLDG+ + E R + + FNSDP I ADT++F + DWNP D Q DR HR+GQ + VH++R + T+E ++ K + N VI + + + DL AE P Sbjct: 1327 HRALIFTQMTKVLDILEQFL---NFHGYLYMRLDGATKIEDRQILTERFNSDPRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSDHTIESNILKKANQKRHLDNVVIQTGDFTTDYFTKLSVKDLL-GAEAP 1482
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: HEPF1_PLAF7 (Probable ATP-dependent helicase PF08_0048 OS=Plasmodium falciparum (isolate 3D7) GN=PF08_0048 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18 Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 28 SPKLVALQEIMDECGIGVDGSSSENAVNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAEN 537 S KL AL++++ +C ++ L+F Q LDI+E +F H+ + +++RLDGS + E+R IV FN+D +I +A+ ++F + DWNP D QAMDR HR+GQ K VHV R + T+EE + Q K + N IN N Sbjct: 1767 SGKLCALEKLLSKC-------------KREGNKCLLFTQFIKMLDILE--IFLNHL-NYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANVVIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFRFVCEYTVEENIWKKQLQKRKLDNICINMGN 1920
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_GIBZE (Helicase SWR1 OS=Gibberella zeae GN=SWR1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18 Identity = 50/140 (35.71%), Postives = 73/140 (52.14%), Query Frame = 1 Query: 106 VNVGQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVI 525 + G HR LIF Q LDI+E+ L ++ YLRLDG+ + E+R + FN+DP I ADT++F + DWNP D Q DR HR+GQ + VH++RL+ T+E ++ K + + VI Sbjct: 1383 LQAGGHRALIFTQMTKVLDILEQFL---NIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQMLDDVVI 1519
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_CRYNE (Helicase SWR1 OS=Cryptococcus neoformans GN=SWR1 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18 Identity = 50/121 (41.32%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVM 483 HR+LIF Q LDI+E +F +H YLRLDGS + E R + + FNSD I ADT+ F + DWNP D Q MDRAHR+GQ + VH++R + T+EE ++ Sbjct: 955 HRVLIFTQMTRVLDILE--MFLSH-NGHRYLRLDGSTKIEDRQVLTERFNSDSRIFVFIASSRSGGVGINLTGADTVFFYDSDWNPSMDRQCMDRAHRIGQTREVHIYRFVSSHTVEENML 1072
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SNF21_SCHPO (Chromatin structure-remodeling complex subunit snf21 OS=Schizosaccharomyces pombe GN=snf21 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.465e-18 Identity = 52/139 (37.41%), Postives = 80/139 (57.55%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPT--IDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINA 531 HRIL+F Q ++I+E L H + YLRLDGS +++ R ++ FN DPT ++ +ADT++ + DWNP +D QA DRAHR+GQ K V ++RLI ++EE +++ ++K+ I VI A Sbjct: 753 HRILMFFQMTQIMNIMEDYL---HYRQWRYLRLDGSTKADDRSKLLGVFN-DPTAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQA 887
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: ISW1_CAEEL (Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis elegans GN=isw-1 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 3.465e-18 Identity = 57/173 (32.95%), Postives = 85/173 (49.13%), Query Frame = 1 Query: 124 RILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNS-DPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENAS--MKTMNTGQLLDLFASAETPXKGGGVSKLSD 633 R+LIF+Q LD++E + H + Y RLDGS E R + ++A+N+ D +AD ++ + DWNP D QAMDRAHR+GQKK V V RLI T++E+++ K+ + N VI S KT+ G ++ + S +SD Sbjct: 453 RVLIFSQFSRMLDLLEDFCWWRHYE---YCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGDMISMIRHGAEQVFAAKDSTISD 622
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_YEAST (Helicase SWR1 OS=Saccharomyces cerevisiae GN=SWR1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.525e-18 Identity = 53/168 (31.55%), Postives = 79/168 (47.02%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTMNTGQLLDLFASAETPXKGGGVSK 624 HR LIF Q LD++E+ L + Y+RLDG+ + E R + + FN+D I ADT++F + DWNP D Q DR HR+GQ + VH++R + T+E ++ K + N VI + + + + DL S E P G K Sbjct: 1263 HRALIFTQMTKVLDVLEQFL---NYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDLLGS-ELPENASGGDK 1426
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_USTMA (Helicase SWR1 OS=Ustilago maydis GN=SWR1 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.525e-18 Identity = 53/147 (36.05%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 115 GQHRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINAENASMKTM 555 G HRILIF Q LDI+E L + YLRLDG+ + E R + + FN D I A ADT++F + DWN + Q MDRAHR+GQ + VH++R + T+EE ++ K + N VI + +T+ Sbjct: 1548 GGHRILIFTQMTRVLDILESFL---NYHGYRYLRLDGATKVESRQALTEQFNRDARISAFILSTRSGGLGINLTGADTVLFYDLDWNAAIEAQCMDRAHRIGQTRDVHIYRFVTEHTIEENMLRKANQKRLLDNVVIQQGEFNTETL 1691
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: SWR1_CANAL (Helicase SWR1 OS=Candida albicans GN=SWR1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNSDPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVI 525 HR LIF Q LDI+E+ L ++ Y+RLDG+ + E R + + FN DP I ADT++F + DWNP D Q DR HR+GQ + VH++R + T+E ++ K + N VI Sbjct: 1383 HRALIFTQMTKVLDILEQFL---NIHGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVI 1514
BLAST of FC923454 vs. ExPASy Swiss-Prot
Match: STH1_YEAST (Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae GN=STH1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.008e-17 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 121 HRILIFAQHKAFLDIIERDLFQTHMKSVTYLRLDGSVESERRFDIVKAFNS-DPTIDAXXXXXXXXXXXXXXXSADTLVFMEHDWNPMRDHQAMDRAHRLGQKKVVHVHRLIMRGTLEEKVMSLQRFKVSIANTVINA 531 HR+L+F Q +DI+E L MK + Y+RLDGS ++E R +++ AFN+ D +ADT++ + DWNP +D QA DRAHR+GQK V + RLI ++EE ++ K+ I VI A Sbjct: 808 HRVLMFFQMTQVMDIMEDFL---RMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQA 942 The following BLAST results are available for this feature:
BLAST of FC923454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923454 ID=FC923454; Name=FC923454; organism=Citrus clementina; type=EST; length=635bpback to top |