FC925453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.270e-42 Identity = 74/146 (50.68%), Postives = 111/146 (76.03%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + +DY+FKLL+IG+S VGK+ L R+ADD++ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +VV E + A+++G F Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDF 161
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.270e-42 Identity = 77/148 (52.03%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISFH 555 M +YD LF+LLLIGDSGVGK+CLL RF D+ + S+ISTIGVDFK++T+E DG +++QIWDTAGQER++TIT YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D + V E + A E G+ F+ Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFY 148
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.331e-42 Identity = 77/146 (52.74%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F +T + +GK +K QIWDTAGQER+R ITS+YYRGA G +++YDVT +F N +WL E+ + N+ +L+GNKCDL V E AKAFA+ + F Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYF 152 HSP 2 Score: 36.965 bits (84), Expect = 1.331e-42 Identity = 21/64 (32.81%), Postives = 29/64 (45.31%), Query Frame = 2 Query: 551 FMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKS--------GCCS 718 FMETSA ATNVE AF + I ++ + + +G+ +N K GCCS Sbjct: 152 FMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCS 215
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.735e-42 Identity = 77/143 (53.85%), Postives = 104/143 (72.73%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +L+GNKCDLT + V+ E + FA E G+ F Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIF 145 HSP 2 Score: 30.4166 bits (67), Expect = 1.735e-42 Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 542 GFPFMETSAKSATNVEQAFMAMAASIKNRM 631 G F+ETSA++A NVE+AF+ A I ++ Sbjct: 142 GLIFLETSARTAHNVEEAFINTAKEIYKKI 171
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB15_MOUSE (Ras-related protein Rab-15 OS=Mus musculus GN=Rab15 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.166e-42 Identity = 76/148 (51.35%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISFH 555 M +YD LF+LLLIGDSGVGK+CLL RF D+ + S+ISTIGVDFK++T++ DG +++QIWDTAGQER++TIT YYR A GI +VYD++ + S+ ++ +W++++D YA E V K+L+GNK D + V E + A E G+ F+ Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIDVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFY 148
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.260e-42 Identity = 73/144 (50.69%), Postives = 105/144 (72.92%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGI 546 + +YD+LFKL+L+GD+ VGK+C++ RF ++ E STIGVDF ++T+E GK +KLQIWDTAGQERFRTIT SYYR A+G I+ YD+T + SF +V W+ ++ +YA N+ +LL+GNK DL+ + VS A++ A+ I Sbjct: 12 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDI 155 HSP 2 Score: 35.039 bits (79), Expect = 2.260e-42 Identity = 17/53 (32.08%), Postives = 30/53 (56.60%), Query Frame = 2 Query: 554 METSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGC 712 +ETSAK ++NVE+AF+ +A + R P + P +Q+ + + + GC Sbjct: 159 IETSAKDSSNVEEAFLRVATELIMRHGG-PLFSEKSPDHIQLNSKDIGEGWGC 210
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.000e-42 Identity = 78/146 (53.42%), Postives = 101/146 (69.18%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 ++EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV+ WL E+ + N+ +LVGNK DL V E AK+FA++ + F Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYF 152 HSP 2 Score: 37.7354 bits (86), Expect = 5.000e-42 Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 2 Query: 551 FMETSAKSATNVEQAFMAMAASIK---NRMASQPASNNARPPTVQIR---GQPVN--QKSGCCS 718 FMETSA ATNVE AF + I ++ A + AS +A P+ + G+ V+ +K GCCS Sbjct: 152 FMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIGKDVSAVKKGGCCS 215
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 6.515e-42 Identity = 77/143 (53.85%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + +++S N+ +L+GNK DL + + V E +AFA E G+ F Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIF 145 HSP 2 Score: 33.8834 bits (76), Expect = 6.515e-42 Identity = 22/75 (29.33%), Postives = 33/75 (44.00%), Query Frame = 2 Query: 542 GFPFMETSAKSATNVEQAFMAMAASIKNRM-----------------ASQPASNNARPPTVQIRGQPVNQKSGCC 715 G FMETSAK+A NVE+A++ A I ++ Q +++ P + Q + SGCC Sbjct: 142 GLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSITSSVGPCSPQQNVSDIGPDSGCC 216
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.441e-41 Identity = 78/139 (56.12%), Postives = 102/139 (73.38%), Query Frame = 1 Query: 118 NEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFAD 534 ++YDYLFKL+LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G +VVYD+T +F NV++WL E+ + +N+ +LVGNK DL + VS E AKAFA+ Sbjct: 9 DDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAE 147 HSP 2 Score: 33.113 bits (74), Expect = 1.441e-41 Identity = 22/66 (33.33%), Postives = 31/66 (46.97%), Query Frame = 2 Query: 551 FMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVN---------QKSGCCST 721 FMETSA + NVE AF + I ++ + A P +GQ +N +K GCCS+ Sbjct: 153 FMETSALESLNVENAFTEVLTEI-YKVVCRKALEVGDDPAALPKGQTINVGKDDVSAVKKVGCCSS 217
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 2.447e-41 Identity = 71/144 (49.31%), Postives = 105/144 (72.92%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGI 546 + +DYLFK++LIGDS VGK+C++ F Y E+ +TIGVDF +R+++ DGK +K+Q+WDTAGQERFRTIT SYYR AH I+ YD+T + +F ++ W++EI++Y + NV +L+GNKCDL + V +E A A++ G+ Sbjct: 11 DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGL 154 HSP 2 Score: 26.5646 bits (57), Expect = 2.447e-41 Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 2 Query: 554 METSAKSATNVEQAFMAMAASI 619 +ETSAK + N+E+ F+ MA + Sbjct: 158 LETSAKESKNIEEVFVLMAKEL 179 The following BLAST results are available for this feature:
BLAST of FC925453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925453 ID=FC925453; Name=FC925453; organism=Citrus clementina; type=EST; length=762bpback to top |