FC925453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 3.178e-54 Identity = 88/147 (59.86%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+ + VS E + A + GI F Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKF 147 HSP 2 Score: 37.7354 bits (86), Expect = 3.178e-54 Identity = 19/43 (44.19%), Postives = 25/43 (58.14%), Query Frame = 2 Query: 527 LRMKLGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNN 655 L + G FMETSAK+ NVE AF +A IK +M + N+ Sbjct: 139 LALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 181
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 3.178e-54 Identity = 88/147 (59.86%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+ + VS E + A + GI F Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKF 147 HSP 2 Score: 37.7354 bits (86), Expect = 3.178e-54 Identity = 19/43 (44.19%), Postives = 25/43 (58.14%), Query Frame = 2 Query: 527 LRMKLGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNN 655 L + G FMETSAK+ NVE AF +A IK +M + N+ Sbjct: 139 LALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 181
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.222e-54 Identity = 96/149 (64.43%), Postives = 124/149 (83.22%), Query Frame = 1 Query: 106 TTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 T + YDYL KLLLIGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+ I+++A+++VNK+L+GNKCD+ KVV K+ ADE GI F Sbjct: 6 TNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKF 154
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.041e-54 Identity = 89/147 (60.54%), Postives = 120/147 (81.63%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 M YDYLFKLLLIGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ + VS E + A + GI F Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKF 147 HSP 2 Score: 34.6538 bits (78), Expect = 7.041e-54 Identity = 16/44 (36.36%), Postives = 26/44 (59.09%), Query Frame = 2 Query: 527 LRMKLGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNA 658 L + G F+E SAKS+ NVE+AF +A I ++ + +N+ Sbjct: 139 LAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNS 182
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 9.180e-54 Identity = 91/147 (61.90%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTVE +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ A + V E A+ A E I F Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERLAREHRIRF 147 HSP 2 Score: 37.7354 bits (86), Expect = 9.180e-54 Identity = 16/54 (29.63%), Postives = 31/54 (57.41%), Query Frame = 2 Query: 551 FMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGC 712 F ETSAKS+ NV++AF ++A I + + + N+++P + ++ + C Sbjct: 147 FFETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLKVSDKKNSNKC 200
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.197e-53 Identity = 87/147 (59.18%), Postives = 119/147 (80.95%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 M YDYLFKLLLIGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNK D+ + VS E + A + GI F Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKF 147 HSP 2 Score: 40.4318 bits (93), Expect = 1.197e-53 Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 2 Query: 527 LRMKLGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQK 703 L + G FMETSAK+ NVE AF +A IK +M + N+ + ++ P QK Sbjct: 139 LALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQK 197
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.088e-53 Identity = 95/143 (66.43%), Postives = 122/143 (85.31%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 YD+L KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+ I+++AS++VNK+L+GNKCD+T KVV K+ ADE GI F Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKF 154
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 7.658e-53 Identity = 90/147 (61.22%), Postives = 117/147 (79.59%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 M YD+LFKLLLIGDSGVGK+CL++RFA+D++ +YISTIG+DFKIRTV+ +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ A + V E A+ A E I F Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRF 147 HSP 2 Score: 35.8094 bits (81), Expect = 7.658e-53 Identity = 15/44 (34.09%), Postives = 28/44 (63.64%), Query Frame = 2 Query: 551 FMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR 682 F ETSAKS+ NV++AF ++A I + + + N++P + ++ Sbjct: 147 FFETSAKSSVNVDEAFSSLARDILLKTGGRRSGTNSKPSSTGLK 190
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.036e-52 Identity = 98/145 (67.59%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 121 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGISF 552 +YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+ +K V +A ADE GI F Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKF 155
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 1.036e-52 Identity = 98/145 (67.59%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 121 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGISF 552 +YDYL KLLLIGDSGVGKSCLLLRF+D S+ S+I+TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+ +K V +A ADE GI F Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKF 155 The following BLAST results are available for this feature:
BLAST of FC925453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925453 ID=FC925453; Name=FC925453; organism=Citrus clementina; type=EST; length=762bpback to top |