FC925453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAN_TETPY (GTP-binding nuclear protein Ran OS=Tetrahymena pyriformis PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 112 MNNEYDYL--FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKV 501 ++N+ D + FKL+L+GD GVGK+ + R + + YI+T GV+ + I+ IWDTAGQE+ + YY GA I+++DVT + ++ N+ +W ++ R ENV +LVGNK D +KV Sbjct: 2 VDNKQDVVAEFKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMILHTTKGAIRFNIWDTAGQEKLGGLREGYYIGADAAIMMFDVTSRITYKNIPKWHKDLTRIC-ENVPIVLVGNKVDSKDSKV 132
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAN_DANRE (GTP-binding nuclear protein Ran OS=Danio rerio GN=ran PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18 Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 118 NEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKV 501 NE FKL+L+GD G GK+ + R + + Y++T+GV+ + IK +WDTAGQE+F + YY A I+++DVT + ++ NV W ++ R EN+ +L GNK D+ KV Sbjct: 4 NEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCENIPIVLCGNKVDIKDRKV 130
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAP2C_MOUSE (Ras-related protein Rap-2c OS=Mus musculus GN=Rap2c PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 136 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 +K++++G GVGKS L ++F +++E Y TI DF + +E D L+I DTAG E+F ++ Y + G I+VY + +Q+SF ++K ++I R E V +LVGNK DL + V +A A E G F Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPF 142
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAP2C_HUMAN (Ras-related protein Rap-2c OS=Homo sapiens GN=RAP2C PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 136 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 +K++++G GVGKS L ++F +++E Y TI DF + +E D L+I DTAG E+F ++ Y + G I+VY + +Q+SF ++K ++I R E V +LVGNK DL + V +A A E G F Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPF 142
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAP2C_BOVIN (Ras-related protein Rap-2c OS=Bos taurus GN=RAP2C PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 136 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 +K++++G GVGKS L ++F +++E Y TI DF + +E D L+I DTAG E+F ++ Y + G I+VY + +Q+SF ++K ++I R E V +LVGNK DL + V +A A E G F Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIVRVKRYEKVPLILVGNKVDLEPEREVMSSEGRALAQEWGCPF 142
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAN_CARAU (GTP-binding nuclear protein Ran OS=Carassius auratus GN=ran PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 118 NEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKV 501 NE FKL+L+GD G GK+ + R + + Y++T+GV+ + IK +WDTAGQE+F + YY A I+++DVT + ++ NV W ++ R EN+ +L GNK D+ KV Sbjct: 4 NEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVR-VCENIPIVLCGNKVDIKDRKV 130
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: GSP2_YEAST (GTP-binding nuclear protein GSP2/CNR2 OS=Saccharomyces cerevisiae GN=GSP2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKV 501 NN FKL+L+GD G GK+ + R + + YI+TIGV+ + + IK +WDTAGQE+F + YY A I+++DVT + ++ NV W ++ R EN+ +L GNK D+ KV Sbjct: 7 NNAEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKV 134
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RP1BL_HUMAN (Ras-related protein Rap-1b-like protein OS=Homo sapiens PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.914e-18 Identity = 48/133 (36.09%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 136 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFA 531 +KL+++G GVGKS L ++F ++E Y TI ++ VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +++V +LVGNKCDL +VV E + A Sbjct: 4 YKLVVLGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYR-EQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLA 135 HSP 2 Score: 23.8682 bits (50), Expect = 9.914e-18 Identity = 10/26 (38.46%), Postives = 15/26 (57.69%), Query Frame = 2 Query: 551 FMETSAKSATNVEQAFMAMAASIKNR 628 F+E+SAKS NV + F + I + Sbjct: 143 FLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAN_TETTH (GTP-binding nuclear protein Ran OS=Tetrahymena thermophila PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.082e-17 Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 136 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKV 501 FKL+L+GD GVGK+ + R + + YI+T GV+ + I+ IWDTAGQE+ + YY GA+ I+++DVT + ++ N+ +W ++ R EN+ +LVGNK D KV Sbjct: 12 FKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMVLYTTKGPIRFNIWDTAGQEKLGGLREGYYIGANAAIMMFDVTSRITYKNIPKWHKDLTRIC-ENIPIVLVGNKVDSKDRKV 132
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17 Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 139 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNK---------LLVGNKCD 483 KL+LIGD VGK+ +L R + E Y STIG DF +T Q+ +Q+WDTAGQE++ +TS+++R + +I+V+D++++ SF N+ W + + S+++N LL+ NK D Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQ---FKSKSINPDGTEKQLPILLLANKSD 131 The following BLAST results are available for this feature:
BLAST of FC925453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925453 ID=FC925453; Name=FC925453; organism=Citrus clementina; type=EST; length=762bpback to top |