FC925453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.390e-47 Identity = 75/147 (51.02%), Postives = 110/147 (74.83%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 +++EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV++WL E+ +A N+ ++ GNK DL + VS + A +++ G+SF Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSF 151 HSP 2 Score: 47.7506 bits (112), Expect = 7.390e-47 Identity = 29/74 (39.19%), Postives = 38/74 (51.35%), Query Frame = 2 Query: 527 LRMKLGFPFMETSAKSATNVEQAFMAMAASI-----KNRMASQPASNNARPP----TVQIRGQPVNQKSGCCST 721 L K G F+ETSA ATN+E+AF + I K +A+Q A+ A P T+ + N K GCCST Sbjct: 143 LSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.110e-46 Identity = 87/143 (60.84%), Postives = 113/143 (79.02%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+D KI+TVE GK IKLQIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL ID +A+E+V ++L+GNKCD+ +VV + A E GI F Sbjct: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRF 148
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.639e-46 Identity = 80/141 (56.74%), Postives = 107/141 (75.89%), Query Frame = 1 Query: 133 LFKLLLIGDSGVGKSCLLLRFAD-DSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 +FK+LLIGDS VGK+ LLLRF D +++ E+ ++ VD+K + + DG+T LQIWDTAGQERFRTITSS+YRGAHG++V YDVTDQ ++NNV W+ EI RY V+++LVGNKCDL K+V+ A+ +AD +GI F Sbjct: 6 VFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPF 146 HSP 2 Score: 40.817 bits (94), Expect = 1.639e-46 Identity = 23/59 (38.98%), Postives = 29/59 (49.15%), Query Frame = 2 Query: 539 LGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 715 LG PF+ETSA + NVE+AFMAMA I + +P + G P K C Sbjct: 142 LGIPFIETSATTGVNVEEAFMAMADEIYRNHIGGSKPSVVKP----VCGSPPRTKKNIC 196
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.893e-46 Identity = 85/148 (57.43%), Postives = 111/148 (75.00%), Query Frame = 1 Query: 109 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 T + YD + KLLL+GDSGVGKSCLLLRF +D + S+I+TIG+DFKIRT+E GK IKLQ+WDTAGQERFRTIT++YYRGA GI+++YDVTD SF NV+ W + ++A+E+ LVGNKCD N+ VS E + A ++ + F Sbjct: 6 TSSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPF 153
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 3.621e-46 Identity = 77/146 (52.74%), Postives = 109/146 (74.66%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + +DY+FKLLLIG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ +N +LVGNKCDL +VVS E + A ++G F Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEF 161 HSP 2 Score: 33.113 bits (74), Expect = 3.621e-46 Identity = 23/64 (35.94%), Postives = 29/64 (45.31%), Query Frame = 2 Query: 539 LGFPFMETSAKSATNVEQAFMAMAASIKNRM------ASQPASNNARPPTVQIRGQPVNQKSGC 712 LGF F E SAK NV+Q F + I ++M +S P SN P + P Q S C Sbjct: 157 LGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP---ALGDTPPPQPSSC 217
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: SEC4_CANGA (Ras-related protein SEC4 OS=Candida glabrata GN=SEC4 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.217e-46 Identity = 85/143 (59.44%), Postives = 115/143 (80.42%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 YD + K+LLIGDSGVGKSCLL+RF +D + S+I+TIG+DFKI+TV+ +GK +KLQ+WDTAGQERFRTIT++YYRGA GII+VYDVTD+ +F N+KQW ++ +A++ LLVGNK D+ +VV+YE +A A E+G+ F Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNKSDMD-TRVVTYEQGEALAKELGLPF 158
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 4.718e-46 Identity = 69/158 (43.67%), Postives = 108/158 (68.35%), Query Frame = 1 Query: 82 DSFDPTHDTTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 D P + YD K++L+GDSGVGK+C L++F D ++L ++I+T+G+D + + V DG +KLQIWDTAGQERFR++T +YYR A ++++YD+T+Q SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+ F Sbjct: 12 DGEAPERSPPFSPNYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPF 169 HSP 2 Score: 51.6026 bits (122), Expect = 4.718e-46 Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 2 Query: 527 LRMKLGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQK--SGCCS 718 L + G PFMETSAK+ NVE AF+A+A +K R QP P+ QIR +QK S CCS Sbjct: 161 LAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQPDE-----PSFQIRDYVESQKKRSSCCS 221
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.731e-46 Identity = 84/147 (57.14%), Postives = 114/147 (77.55%), Query Frame = 1 Query: 112 MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 M+ EY++LFK +L GDSGVGK+ +L R DD++ E++I TIG++FKI+TV +GK IKLQIWDTAG++RFR + +S+YRG HG+I+VYDVTDQ SF NV W+ +I RYA+ENV K+++GNK DL + KVV A+ FAD + I F Sbjct: 1 MSKEYEHLFKFVLAGDSGVGKTSILFRITDDTFTETHI-TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPF 145 HSP 2 Score: 30.8018 bits (68), Expect = 4.731e-46 Identity = 14/42 (33.33%), Postives = 21/42 (50.00%), Query Frame = 2 Query: 539 LGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARP 664 L PF E SAK + N+E+AF+++ NR+ P Sbjct: 141 LDIPFKEISAKQSINIEEAFISLVKLCINRIEETSLKKTQSP 182
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 1.774e-45 Identity = 68/158 (43.04%), Postives = 109/158 (68.99%), Query Frame = 1 Query: 82 DSFDPTHDTTMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLE-SYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 D P + YD K++L+GD+GVGK+C L++F D ++L ++I+T+G+DF+ + V DG +KLQIWDTAGQERFR++T +YYR A ++++YD+T++ SF+N++ WL EI YA +V +L+GNK D+++ +V+ E + A E G+ F Sbjct: 12 DGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPF 169 HSP 2 Score: 49.6766 bits (117), Expect = 1.774e-45 Identity = 30/66 (45.45%), Postives = 39/66 (59.09%), Query Frame = 2 Query: 527 LRMKLGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQK--SGCCS 718 L + G PF+ETSAK+ NVE AF+A+A +K R A + A P+ QIR +QK S CCS Sbjct: 161 LAREYGVPFLETSAKTGMNVELAFLAIAKELKYR-----AGHQADEPSFQIRDYVESQKKRSSCCS 221
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.734e-45 Identity = 76/146 (52.05%), Postives = 116/146 (79.45%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YDVT+++SFN+V+ W+ +I Y+ +N +LVGNKCD+ +V+S+E + AD++G+ F Sbjct: 15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEF 160 The following BLAST results are available for this feature:
BLAST of FC925453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925453 ID=FC925453; Name=FC925453; organism=Citrus clementina; type=EST; length=762bpback to top |