FC925453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.236e-44 Identity = 78/143 (54.55%), Postives = 104/143 (72.73%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +LVGNKCDL+ + VSYE + FA E G+ F Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIF 145 HSP 2 Score: 34.2686 bits (77), Expect = 7.236e-44 Identity = 25/69 (36.23%), Postives = 32/69 (46.38%), Query Frame = 2 Query: 542 GFPFMETSAKSATNVEQAFMAMAASIKNRMASQ--PASNN--------ARPPTVQIRGQPVNQKSGCCS 718 G FME SAK+A NVE+AF+ A +I ++ SN A P G +Q GCCS Sbjct: 142 GLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYAIPGQSGGAGSSSSQGGGCCS 210
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.228e-43 Identity = 78/146 (53.42%), Postives = 108/146 (73.97%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F RT++ +G+T+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +L+GNK DL + V+ E A+++A++ G+SF Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSF 151 HSP 2 Score: 35.4242 bits (80), Expect = 1.228e-43 Identity = 22/71 (30.99%), Postives = 35/71 (49.30%), Query Frame = 2 Query: 536 KLGFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR-GQPV--------NQKSGCCST 721 K G F+ETSA A NVE+AF + + + ++ + S++ I+ GQ + N K CCS+ Sbjct: 146 KEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.087e-43 Identity = 78/143 (54.55%), Postives = 104/143 (72.73%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +LVGNKCDL+ + VSYE + FA E G+ F Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIF 145 HSP 2 Score: 32.3426 bits (72), Expect = 2.087e-43 Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 2 Query: 542 GFPFMETSAKSATNVEQAFMAMAASIKNRM 631 G FME SAK+A NVE+AF+ A +I ++ Sbjct: 142 GLIFMEASAKTAQNVEEAFVKTAGAIYKKI 171
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.718e-43 Identity = 77/143 (53.85%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + +++S N+ +L+GNK DL + + V E +AFA E G+ F Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIF 145 HSP 2 Score: 38.5058 bits (88), Expect = 2.718e-43 Identity = 24/75 (32.00%), Postives = 32/75 (42.67%), Query Frame = 2 Query: 542 GFPFMETSAKSATNVEQAFMAMAASIKNRM-----------------ASQPASNNARPPTVQIRGQPVNQKSGCC 715 G FMETSAK+A NVE+AF+ A I ++ Q S + P Q + + SGCC Sbjct: 142 GLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.542e-43 Identity = 73/146 (50.00%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 109 TMNNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGI 546 T++ +DYLFK++LIGDS VGK+C++ F Y+E+ +TIGVDF +R +E DGK +K+Q+WDTAGQERFRTIT SYYR AH I+ YD+T + +F +V W++EI++Y + N+ +L+GNKCDL + V +E A A++ G+ Sbjct: 9 TVDENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGL 154 HSP 2 Score: 29.6462 bits (65), Expect = 3.542e-43 Identity = 15/47 (31.91%), Postives = 25/47 (53.19%), Query Frame = 2 Query: 554 METSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPV 694 +ETSAK + N+++ F+ MA + R S P P ++ + PV Sbjct: 158 LETSAKESKNIDEVFVLMARELMAR-HSLPLYGEGAPGSLPLESTPV 203
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 4.615e-43 Identity = 80/146 (54.79%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 +++YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ +A N+ +LVGNK DL + V E A+AF + G+SF Sbjct: 6 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSF 151 HSP 2 Score: 32.7278 bits (73), Expect = 4.615e-43 Identity = 21/70 (30.00%), Postives = 33/70 (47.14%), Query Frame = 2 Query: 542 GFPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPV-----------NQKSGCCS 718 G F+ETSA +TNVE+AF + I + ++ + + P + G+ V +K GCCS Sbjct: 148 GLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIG-EGRDVIVIDNAHDDGGKKKGGCCS 216
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 77/146 (52.74%), Postives = 109/146 (74.66%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + +DY+FKLLLIG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ +N +LVGNKCDL +VV E + AD++G F Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEF 161
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 75/146 (51.37%), Postives = 112/146 (76.71%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +V+S E + +++G F Sbjct: 24 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEF 169
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 75/146 (51.37%), Postives = 112/146 (76.71%), Query Frame = 1 Query: 115 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 + +DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +V+S E + +++G F Sbjct: 24 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEF 169
BLAST of FC925453 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.016e-43 Identity = 77/143 (53.85%), Postives = 104/143 (72.73%), Query Frame = 1 Query: 124 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGISF 552 Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +L+GNKCDLT + V+ E + FA E G+ F Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIF 145 HSP 2 Score: 31.9574 bits (71), Expect = 6.016e-43 Identity = 22/72 (30.56%), Postives = 31/72 (43.06%), Query Frame = 2 Query: 542 GFPFMETSAKSATNVEQAFMAMAASIKNRMASQP--------------ASNNARPPTVQIRGQPVNQKSGCC 715 G F+ETSA++A NVE+AF+ A I ++ NA P TV+ + S CC Sbjct: 142 GLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213 The following BLAST results are available for this feature:
BLAST of FC925453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925453 ID=FC925453; Name=FC925453; organism=Citrus clementina; type=EST; length=762bpback to top |