FC929825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21 Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNK DLTANKVV+ ETAK + Sbjct: 86 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAF 139
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAK 180 +VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVGNKCDL N+VVSYE K Sbjct: 86 VVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGK 137
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK + Sbjct: 86 VVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEF 139
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK + Sbjct: 89 VVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEF 142
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK + Sbjct: 89 VVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEF 142
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK + Sbjct: 89 VVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEF 142
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 9.825e-20 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK + Sbjct: 89 VVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEF 142
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 2.189e-19 Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 IVYDVTD+ESFNNVKQWL+EIDRYASDNVNKLLVGNK DLT N+ + YETAK + Sbjct: 86 IVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAF 139
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.734e-19 Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVGNK DLT+ KVV Y AK + Sbjct: 86 VVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAF 139
BLAST of FC929825 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19 Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 1 Query: 25 IVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKVY 186 +VYDVTDQ SFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK + Sbjct: 89 VVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEF 142 The following BLAST results are available for this feature:
BLAST of FC929825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929825 ID=FC929825; Name=FC929825; organism=Citrus clementina; type=EST; length=814bpback to top |