FC930329

Overview
NameFC930329
Unique NameFC930329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 2 
Query:  500 SRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFP 688
            +R  HYRGVR+RPWG++AAEIRDP K   RVWLGTF+T              +RG +A  NFP
Sbjct:    7 AREVHYRGVRKRPWGRYAAEIRDPWKK-TRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68
The following BLAST results are available for this feature:
BLAST of FC930329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ERF81_ARATH6.413e-1152.38Ethylene-responsive transcription factor 12 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC34006C08EF PostHarvC1 Citrus clementina cDNA clone C34006C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930329 ID=FC930329; Name=FC930329; organism=Citrus clementina; type=EST; length=697bp
GAGGTTGCAGTTGCACACTCACAATTCACAAAGAAAGTTAACGACAAGGA
ATAGGAAATATATACATAAACCAATTTCTGTTTTTAAATCCGGAAGCAAA
ATGCACGGACACAGTAGTAGTGGTGGTAGTATGAATATGATGCCGTCGGA
TTATGCTGTGCTGGATTCAGTTCGCCAGCACTTACTCGGCGAATCGGAGA
CTGGACTGAGCAGCGTGTCATCAGCGAGTTCCAAGTCCAACGGGGCTCCC
CCTACTTATTTCAGGAGCTCAAGCTTTAGCCGATTGTACCCATGTCTAAC
GGACAACTGGGGGGACCTCCCTTTGAGGGAGAACGACTCCGAGGACATGC
TTGTCTTTAATTTCTTGCGTGATGCCCTAACAGTTGGATGGGTTCCACAG
GAGCAGTTAGCCGAATCTGATCGCCATCAGGTGGCGGAAGTGGCGCCGGC
ACCGGCGTTACCGGAGGAGCGAGGTGCTCCGGCTCCTACAGTGGTGCCTT
CTAGGGGGAAGCATTACAGGGGGGTTAGGCAGAGACCTTGGGGGAAGTTT
GCGGCCGAAATACGTGACCCGGCTAAGAATGGGGCTCGGGTTTGGCTCGG
GACTTTCGAGACGGCTGAGGATGCGGCTCTGGCTTATGACCGAGCCGCTT
ACAGGATGAGGGGATCAAGGGCTCTTTTGAATTTTCCCCCTAGGATC
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