FC930329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44 Identity = 96/200 (48.00%), Postives = 111/200 (55.50%), Query Frame = 2 Query: 146 SDYAVLDSVRQHLLGEXXXXXXXXXXXXXXXN-----GAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPT-----------VVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPPRI 697 SDYA L+S+R+HLLGE + P Y R+ SFS+LYPC T++WGDLPL+ENDSEDMLV+ L DA GW P ++ DR P V ++GKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFET MRGSRALLNFP R+ Sbjct: 9 SDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKLYPCFTESWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRV 208
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40 Identity = 81/153 (52.94%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 251 PTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPS----RGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPPRI 697 P Y RSSSFS L PCLT++WGDLPL+ NDSEDM+++ FL+DA ++GW P +E + + PTV P+ +G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+E+ MRG++ALLNFP RI Sbjct: 18 PVYCRSSSFSSLMPCLTESWGDLPLKVNDSEDMVIYGFLQDAFSIGWTPSNLTSEEVKLEPREEIEPAMST---SVSPPTVAPAALQPKGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRI 167
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.263e-39 Identity = 84/155 (54.19%), Postives = 97/155 (62.58%), Query Frame = 2 Query: 251 PTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAP------APTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPPRI 697 P Y R+SSFS L PCLTD WGDLPL+ +DSEDM+++ L DALT GW P + + + AP A VVP +G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+ET MRGS+ALLNFP RI Sbjct: 10 PVYHRTSSFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTTGWTPFNLTSTEIKAEPREEIEPATSPVPSVAPPAETTTAQAVVP-KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRI 163
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.270e-39 Identity = 82/152 (53.95%), Postives = 97/152 (63.82%), Query Frame = 2 Query: 242 GAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPPRI 697 G P Y R+SSFSRL PCLT+ WGDLPL+ +DSEDM+++ L+DAL VGW P A + + APA + RG+HYRGVR+RPWGKFAAEIRDPAKNGARVWLGT+ET MRGS+A LNFP RI Sbjct: 16 GEFPVYRRNSSFSRLIPCLTETWGDLPLKVDDSEDMVIYTLLKDALNVGWSPFNFSAGEVKSEQREEEIVVSPAETTAAPAAEL--PRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRI 165
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.804e-37 Identity = 83/156 (53.21%), Postives = 95/156 (60.90%), Query Frame = 2 Query: 248 PPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAP------APTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPPRI 697 PPT SFS L PCLTD WGDLPL+ +DSEDM+++ L DALT GW P + + + AP A VVP +G+HYRGVRQRPWGKFAAEIRDPAKNGARVWLGT+ET MRGS+ALLNFP RI Sbjct: 10 PPT-----SFSSLMPCLTDTWGDLPLKVDDSEDMVIYGLLSDALTAGWTPFNLTSTEIKAEPREEIEPATIPVPSVAPPAETTTAQAVVP-KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRI 159
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31 Identity = 82/188 (43.62%), Postives = 98/188 (52.13%), Query Frame = 2 Query: 146 SDYAVLDSVRQHLLGEXXXXXXXXXXXXXXXNGAPPTYFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESD----RHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPPRI 697 SDYA+L+S+ +HLLG G R + S C T++WG LPL+ENDSEDMLV+ L+DA + D + + + P T + KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFET MRGSRALLNFP R+ Sbjct: 9 SDYALLESITRHLLG-----------------GGGENELRLNE-STPSSCFTESWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKKAIPV-TETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRV 177
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.998e-29 Identity = 69/144 (47.92%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 257 YFRSSSFSRLYPCLTDNWGDLPLRENDSEDMLVFNFLRDALTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFP 688 YFR+ SFS + L DNW DLPL +DS+DM ++N LRDA++ GW P S + G+ AP +G YRGVR+RPWGKFAAEIRDP KNGARVWLGT+ET +RGS+A LNFP Sbjct: 16 YFRNPSFSNVI--LNDNWSDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKAS-----GSHAPR---QKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 57/130 (43.85%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 314 DLPLRENDSEDMLVFNFLRDA--LTVGWVPQEQLAESDRHQXXXXXXXXXXXXXRGAPAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFPPRI 697 DLPL ENDS++M+++ L +A L + ++PQ R+Q P + GK YRGVR+RPWGK+AAEIRD A++GARVWLGTFET MRG++ALLNFP I Sbjct: 8 DLPLNENDSQEMVLYEVLNEANALNIPYLPQ-------RNQLLPRNNILR-------PLQCI----GKKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEI 119
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17 Identity = 40/70 (57.14%), Postives = 45/70 (64.29%), Query Frame = 2 Query: 479 PAPTVVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFP 688 P P V +HYRGVR RPWGKFAAEIRDP + G RVWLGTFET +RGS+A+LNFP Sbjct: 125 PVPVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFP 194
BLAST of FC930329 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 40/66 (60.61%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 491 VVPSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETXXXXXXXXXXXXXXMRGSRALLNFP 688 VVP+ KHYRGVRQRPWGKFAAEIRDP + G RVWLGTF+T +RGS+A++NFP Sbjct: 137 VVPTEKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFP 202 The following BLAST results are available for this feature:
BLAST of FC930329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930329 ID=FC930329; Name=FC930329; organism=Citrus clementina; type=EST; length=697bpback to top |