FC930403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: SFC1_YEAST (Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae GN=SFC1 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.782e-24 Identity = 70/191 (36.65%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 147 KKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQL--DTTGTYK----GIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPEL----LKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFT 689 KK P + ++G G+ EA C P+D IK R+Q+ G G I G T+ + EG AL+KGL + K +R S +++ + ++G +S +AG GAG+ EA+ +V P EVVKIRLQ Q L+P KY IH A I++EEG+ L+ G + T R TNQ A FT Sbjct: 5 KKASHPAINLMAGGTAGLFEALCCHPLDTIKVRMQIYRRVAGIEHVKPPGFIKTGRTIYQKEGFLALYKGLGAVVIGIIPKMAIRFSSYEFYRTLLVNKESGIVSTGNTFVAGVGAGITEAVLVVNPMEVVKIRLQAQH-LTPSEPNAGPKYNNAIHAAYTIVKEEGVSALYRGVSLTAARQATNQGANFT 194
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: TXTP_RAT (Tricarboxylate transport protein, mitochondrial OS=Rattus norvegicus GN=Slc25a1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 132 PSPVPKKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGT---YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIR-LQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 P K P ++G L G +E C P + +KT+LQLD Y+GI C R+ GV L++GL+ K +R G + +D++ G++ ++ L+ G GAGV EA+ +V P E VK++ + Q +P KY+G H R I+RE+GL G + G TV++ G+NQA F Sbjct: 15 PGSGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERANPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQ-GRLDSRRGLLCGLGAGVAEAVVVVCPMETVKVKFIHDQTSSNP---KYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRF 199
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: TXTP_HUMAN (Tricarboxylate transport protein, mitochondrial OS=Homo sapiens GN=SLC25A1 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 63/189 (33.33%), Postives = 98/189 (51.85%), Query Frame = 3 Query: 132 PSPVPKKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTG---TYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIR-LQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 P+ K P ++G L G +E C P + +KT+LQLD Y+GI C R+ GV L++GL+ K +R G + +D++ G++ + L+ G GAGV EA+ +V P E +K++ + Q +P KY+G H R I+RE+GL G + G TV++ G+NQA F Sbjct: 15 PASGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQ-GRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNP---KYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRF 199
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: TXTP_BOVIN (Tricarboxylate transport protein, mitochondrial OS=Bos taurus GN=SLC25A1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.412e-21 Identity = 62/190 (32.63%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 129 NPSPVPKKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTG---TYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIR-LQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 +P K P ++G L G +E C P + +KT+LQLD Y+GI C R+ G+ L++GL+ K +R G+ + +D++ G++ + L+ G GAGV EA+ +V P E +K++ + Q SP KY+G H R I+RE+GL G + G TV++ G+NQ F Sbjct: 14 SPGSGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGLLGLYRGLSSLLYGSIPKAAVRFGTFEFLSNHMRDAQ-GRLDSTRGLLCGLGAGVPEAVVVVCPMETIKVKFIHDQTSASP---KYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQGIRF 199
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: TXTP_CAEEL (Putative tricarboxylate transport protein, mitochondrial OS=Caenorhabditis elegans GN=K11H3.3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20 Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 177 VSGSLGGVVEACCLQPIDVIKTRLQLD---TTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 V G + G +E C P + +KT+LQLD T ++G I C G L++GL+ K + R G+ +S D + G +S RL+ G GAG+ EA+ VTP E VK++ +GL+ KYKG +H I++ EGL G++ G T+ + G+NQA F Sbjct: 30 VIGGITGGIEICITFPTEYVKTQLQLDERSATPKFRGPIDCVKQTVNGHGFFGLYRGLSVLLYGSIPKSSFRFGTFEYLKSQAADER-GNLSPVMRLLCGLGAGLSEAVFAVTPMETVKVKFIHDQGLAQP--KYKGFVHGVGCIVKAEGLGGIYKGVTATMAKQGSNQAIRF 199
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: TXTP_YEAST (Tricarboxylate transport protein OS=Saccharomyces cerevisiae GN=CTP1 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19 Identity = 60/195 (30.77%), Postives = 96/195 (49.23%), Query Frame = 3 Query: 135 SPVPKKTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQL--DTTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRL-QQQRGLSPELLKY----KGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKN 698 S K + P ++GSL G EAC P + KTRLQL + + + ++T+G+ +++ G F T K +R + +DS+TG++S ++AG GAG+LE++A VTPFE +K L ++ +P KY +G + ++R++G GL+ G P MR NQA N Sbjct: 3 SKATKSDVDPLHSFLAGSLAGAAEACITYPFEFAKTRLQLIDKASKASRNPLVLIYKTAKTQGIGSIYVGCPAFIIGNTAKAGIRFLGFDTIKDMLRDSETGELSGTRGVIAGLGAGLLESVAAVTPFEAIKTALIDDKQSATP---KYHNNGRGVVRNYSSLVRDKGFSGLYRGVLPVSMRQAANQAVRLGCYN 194
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: ODC2_YEAST (Mitochondrial 2-oxodicarboxylate carrier 2 OS=Saccharomyces cerevisiae GN=ODC2 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19 Identity = 56/183 (30.60%), Postives = 93/183 (50.82%), Query Frame = 3 Query: 150 KTIPPYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGT-----------YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDS-KTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662 K +P + +SG++ G+ E + P+DV+KTR QL+ T Y G+I C + + EG L++G++ K + N +Q FK+ T + + + + AG AG+ EA A++ PFE++KIR+Q + Y GP+ C + I+ EG+ GL+ G T+ RN Sbjct: 8 KPLPFIYQFISGAVAGISELTVMYPLDVVKTRFQLEVTTPTAAAVGKQVERYNGVIDCLKKIVKKEGFSRLYRGISSPMLMEAPKRATKFACNDQYQKIFKNLFNTNETTQKISIAAGASAGMTEA-AVIVPFELIKIRMQDVKS------SYLGPMDCLKKTIKNEGIMGLYKGIESTMWRN 183
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: HDCPA_DANRE (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog A OS=Danio rerio GN=hdmcpa PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 55/177 (31.07%), Postives = 90/177 (50.85%), Query Frame = 3 Query: 177 VSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQ----RGLSPELL---KYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 ++GS GG P+D +K R+Q T + GI C R EGV +KG+ T +++ ++ G+ A + + + M+G GV + +++++P ++VK+RLQ Q ++P+ KY GPIHC I RE+GL GL+ GA P +R+G + A F Sbjct: 7 LAGSFGGACGVAVGYPLDTVKVRIQ--TQKQFTGIWQCIVLTIRKEGVHGFFKGMFLPITTISMTSSVVFGTYRNCLQALSYIRKAENTKLDVFMSGLAGGVAQ-VSVMSPGDIVKVRLQCQTESRHSVNPKYSVKPKYSGPIHCLLSICREQGLSGLYRGALPLALRDGPSFATYF 180
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: S2545_MOUSE (Solute carrier family 25 member 45 OS=Mus musculus GN=Slc25a45 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 57/176 (32.39%), Postives = 93/176 (52.84%), Query Frame = 3 Query: 162 PYMKAVSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMG--SN---AVFQSAFKDSKTGKISNQGRLMAGFGAGVLEALAIVTPFEVVKIRLQQQRG----LSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRN 662 P + V+G + G V P D +K RLQ T TY+GI+ C R E V +KG++ + L ++ G SN A+ ++ ++ + S +AG G+L+A + PF+++K+RLQ Q +S + +Y+GP+HCA I+REEG GL+ G+ V+R+ Sbjct: 2 PVEEFVAGWISGAVGLVLGHPFDTVKVRLQ--TQSTYQGIVDCVVKTYRHESVLGFFKGMSFPIASVALVNSVLFGVYSNTLLALTATSHQERRAQPPSYTNIFIAGCTGGLLQAYCLA-PFDLIKVRLQNQTEPRMQISSSMPRYRGPVHCAASILREEGPQGLFRGSWALVLRD 174 HSP 2 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 57/182 (31.32%), Postives = 84/182 (46.15%), Query Frame = 3 Query: 177 VSGSLGGVVEACCLQPIDVIKTRLQLDTTGT---------YKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNAVFQSAFKDSKTGKISNQGR---LMAGFGAGVLEALAIVTPFEVVKIRLQQQRGLSPELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMF 686 ++G GG+++A CL P D+IK RLQ T Y+G +HC A++ R EG + L++G + L L+ T +G V T + N L+AG AG+ + TPF+V+K R+Q GL KY G + C R+EG+ + G R AA F Sbjct: 104 IAGCTGGLLQAYCLAPFDLIKVRLQNQTEPRMQISSSMPRYRGPVHCAASILREEGPQGLFRG----SWALVLRDTPTLGMYFVTYEGLCRQYTPEGQNPSSATVLVAGGFAGIASWIT-ATPFDVIKSRMQMD-GLKGR--KYGGMLDCMASSFRQEGIGVFFKGMTLNSARAFPVNAATF 277
BLAST of FC930403 vs. ExPASy Swiss-Prot
Match: HDCPB_DANRE (Hepatocellular carcinoma down-regulated mitochondrial carrier homolog B OS=Danio rerio GN=hdmcpb PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 56/183 (30.60%), Postives = 95/183 (51.91%), Query Frame = 3 Query: 177 VSGSLGGVVEACCLQPIDVIKTRLQLDTTGTYKGIIHCGATVSRTEGVRALWKGLTPFATHLTLKYTLRMGSNA---VFQSAFKDSKTGKISNQGRL-MAGFGAGVLEALAIVTPFEVVKIRLQQQ----RGLSPELL-KYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKN 698 ++GS+GG P+D +K RLQ T Y G C R EG++ ++G++ + +++ +L G+ F + G+ ++ + +AGF GV + L ++ P ++VK+RLQ Q + +S E KY+GP+ C I R+EGL GL+ G+A +R+G + A F N Sbjct: 7 LAGSVGGAFGVAVGYPLDTVKVRLQTQTG--YSGFWQCVRKTCRNEGLQGFYRGMSMPISTVSISSSLVFGTYRNILQFLHQLQHRSAGEPHHKAHIFLAGFTGGVTQVL-VMAPADIVKVRLQCQTEPVQHISQESSSKYRGPVQCLLRIARDEGLLGLYKGSAALALRDGPSFATYFLTYN 186 The following BLAST results are available for this feature:
BLAST of FC930403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930403 ID=FC930403; Name=FC930403; organism=Citrus clementina; type=EST; length=707bpback to top |