FC931384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 3.791e-93 Identity = 164/196 (83.67%), Postives = 173/196 (88.27%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSKLQS+A+REAISSI+ + KET RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRPKMK+CMLGDAQHVEEAEKIGL+ MDVE +HAFLASESVIKQIPRLLGPGLNKAGKFPTLV+HQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK Sbjct: 1 MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRPKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 196 HSP 2 Score: 43.1282 bits (100), Expect = 3.791e-93 Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMGPSTASF 713 ++++NWQNVRCLYLKSTMGP F Sbjct: 193 LLKKNWQNVRCLYLKSTMGPPNRVF 217
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 8.452e-90 Identity = 162/196 (82.65%), Postives = 170/196 (86.73%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSKLQS+A+REAI++I S E KRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDAQHVEEAEK+GL+ MDVE YHAFLASESVIKQIPRLLGPGLNKAGKFPTLV+HQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK Sbjct: 1 MSKLQSEAVREAITTITGKS-EAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 195 HSP 2 Score: 42.743 bits (99), Expect = 8.452e-90 Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMGPSTASF 713 ++++NWQNVRCLYLKSTMGP F Sbjct: 192 LLKKNWQNVRCLYLKSTMGPPQRIF 216
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 9.246e-89 Identity = 159/196 (81.12%), Postives = 170/196 (86.73%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSKLQS+A+REAI++I S+E KRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDAQHVEEAEK+GL MDVE YHAFLASESVIKQIPRLLGPGLNKAGKFPTLV+HQESLE+KVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ+FQNVQMSVNFLVSLLKK Sbjct: 1 MSKLQSEAVREAITTIKGKSEE-KKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKK 195 HSP 2 Score: 42.743 bits (99), Expect = 9.246e-89 Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMGPSTASF 713 ++++NWQNVRCLYLKSTMGP F Sbjct: 192 LLKKNWQNVRCLYLKSTMGPPQRIF 216
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_SPOFR (60S ribosomal protein L10a OS=Spodoptera frugiperda GN=RpL10A PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 5.386e-65 Identity = 117/195 (60.00%), Postives = 148/195 (75.90%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L E +++++Q SK+ KRNF ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPKM+VC+LGD QH +EA+ + + MD E Y AFLASES+IKQIPRLLGPGLNKAGKFP L++HQES+ K++E KAT+KFQ+KKVLC+ VAVG++ M ++ QNV +S+NFLVSLLKK Sbjct: 3 SKVSRDTLYECVNAVLQASKD-KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKSLTVPCMDAEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKATIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKK 196 HSP 2 Score: 33.8834 bits (76), Expect = 5.386e-65 Identity = 12/20 (60.00%), Postives = 19/20 (95.00%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMGP 698 +++++WQNVR L++KSTMGP Sbjct: 193 LLKKHWQNVRSLHMKSTMGP 212
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: R10AB_DROME (60S ribosomal protein L10a-2 OS=Drosophila melanogaster GN=RpL10Ab PE=1 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 7.023e-65 Identity = 116/195 (59.49%), Postives = 146/195 (74.87%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L E ++ +++ S + KR F ET+ELQIGLKNYDPQKDKRFSG+VKL HIPRPKMKVC+LGD QH +EA+ +D+MD E Y AFLASES+IKQIPRLLGPGLNKAGKFP L++HQES+ K+ E K+T+KFQ+KKVLC+ VAVG++ M+ ++ QNV +S+NFLVSLLKK Sbjct: 3 SKVSRDTLYEGVNGLLEASAK-KKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVSLLKK 196 HSP 2 Score: 33.8834 bits (76), Expect = 7.023e-65 Identity = 12/20 (60.00%), Postives = 19/20 (95.00%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMGP 698 ++++NWQNVR L++KS+MGP Sbjct: 193 LLKKNWQNVRSLHVKSSMGP 212
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_XENLA (60S ribosomal protein L10a OS=Xenopus laevis GN=rpl10a PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.849e-62 Identity = 110/195 (56.41%), Postives = 145/195 (74.36%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L EA+ ++Q SK+ KR F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK +C+LGD QH +EA+ + L +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E+L +KV+E K+T+KFQ+KKVLC+ VAVG++ + E+++ N+ +S+NFLVSLLKK Sbjct: 3 SKVSRDTLYEAVREVLQGSKK-KKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSLCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKLTEEELVYNIHLSINFLVSLLKK 196 HSP 2 Score: 35.4242 bits (80), Expect = 1.849e-62 Identity = 13/19 (68.42%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KSTMG Sbjct: 193 LLKKNWQNVRALYIKSTMG 211
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_DANRE (60S ribosomal protein L10a OS=Danio rerio GN=rpl10a PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 6.970e-62 Identity = 112/196 (57.14%), Postives = 141/196 (71.94%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSK+ D L EA+ VQ KR F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +EA+ L +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E+L +KV+E K+T+KFQ+KKVLC+ VAVG++ M E+++ N+ ++VNFLVSLLKK Sbjct: 1 MSKVSRDTLYEAVKE-VQAGSRRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYNIHLAVNFLVSLLKK 195 HSP 2 Score: 35.4242 bits (80), Expect = 6.970e-62 Identity = 13/19 (68.42%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KSTMG Sbjct: 192 LLKKNWQNVRALYIKSTMG 210
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_NEUCR (60S ribosomal protein L10a OS=Neurospora crassa GN=rpl-10a PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.015e-61 Identity = 109/196 (55.61%), Postives = 147/196 (75.00%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSK+ A+R+ ++ +++YS ET KRNF ET+ELQIGLKNYDPQ+DKRFSG+++LP IPRP M +C+LGD ++ A+ G+D M V+ Y AF+ASE++IKQIPRLLGPGL+KAGKFPT V+H + L K+NE K+T+KFQLKKVLCMGVAVGN+ M ++Q+ N+ +++N+LVSLLKK Sbjct: 1 MSKISVAAVRQHVTDLLEYSNETKKRNFLETVELQIGLKNYDPQRDKRFSGTIRLPSIPRPNMSICILGDQHDIDRAKHGGVDAMSVDDLKKLNKNKKLIKKLARKYDAFVASEALIKQIPRLLGPGLSKAGKFPTPVSHSDDLTGKLNEVKSTIKFQLKKVLCMGVAVGNVGMTQEQLVGNIMLAINYLVSLLKK 196 HSP 2 Score: 25.7942 bits (55), Expect = 2.015e-61 Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMGP 698 ++++ WQNV L +K+TM P Sbjct: 193 LLKKGWQNVGSLTIKATMSP 212
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_ICTPU (60S ribosomal protein L10a OS=Ictalurus punctatus GN=rpl10a PE=2 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 1.683e-60 Identity = 110/196 (56.12%), Postives = 141/196 (71.94%), Query Frame = 1 Query: 64 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 MSK+ D L EA+ VQ + +R F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +EA+ + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E+L +KV+E K+T+KFQ+KKVLC+ VAVG++ M E ++ N+ ++VNFLVSLLKK Sbjct: 1 MSKVSRDTLYEAVRE-VQAGSISKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPKFSVCVLGDQQHCDEAKAAEIPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKKVLCLAVAVGHVRMSEDELVYNIHLAVNFLVSLLKK 195 HSP 2 Score: 33.8834 bits (76), Expect = 1.683e-60 Identity = 12/19 (63.16%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KS+MG Sbjct: 192 LLKKNWQNVRALYIKSSMG 210
BLAST of FC931384 vs. ExPASy Swiss-Prot
Match: RL10A_RAT (60S ribosomal protein L10a OS=Rattus norvegicus GN=Rpl10a PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.683e-60 Identity = 105/195 (53.85%), Postives = 142/195 (72.82%), Query Frame = 1 Query: 67 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 651 SK+ D L EA+ ++ + + +R F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKK Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKK 196 HSP 2 Score: 35.4242 bits (80), Expect = 1.683e-60 Identity = 13/19 (68.42%), Postives = 18/19 (94.74%), Query Frame = 3 Query: 639 IVEENWQNVRCLYLKSTMG 695 ++++NWQNVR LY+KSTMG Sbjct: 193 LLKKNWQNVRALYIKSTMG 211 The following BLAST results are available for this feature:
BLAST of FC931384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931384 ID=FC931384; Name=FC931384; organism=Citrus clementina; type=EST; length=744bpback to top |