FC931788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.236e-39 Identity = 90/172 (52.33%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 178 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 + WF VLASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ +VPF++LGNKID P+A SE ELR LGL N TTG ++ RP+EVFM S Sbjct: 6 IFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCS 172
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39 Identity = 91/172 (52.91%), Postives = 104/172 (60.47%), Query Frame = 1 Query: 178 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 L WF +L+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ NVPF VLGNKID P A SE ELR LGL N TTG K+ RP+E+FM S Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKI----EGQRPIELFMCS 172
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 90/167 (53.89%), Postives = 105/167 (62.87%), Query Frame = 1 Query: 193 YGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 + VL+SLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEELSIG +KF FDLGGH ARR+W ER ESK N PF++LGNKID P A SE++LR LGL TTGKGKV L +RP+EVFM S Sbjct: 4 WDVLSSLGLMNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQ-TTGKGKVPL--EGIRPIEVFMCS 167
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38 Identity = 88/172 (51.16%), Postives = 104/172 (60.47%), Query Frame = 1 Query: 178 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 L WF +L+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ VPF++LGNKID P A SE ELR LGL N TTG ++ RP+E+FM S Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLN-TTGDARI----EGQRPVELFMCS 172
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38 Identity = 89/177 (50.28%), Postives = 104/177 (58.76%), Query Frame = 1 Query: 175 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 F+ +W Y VL LGL++K K++FLGLDNAGKTTLL MLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L + N RP+EVFM S Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCS 179
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38 Identity = 88/169 (52.07%), Postives = 104/169 (61.54%), Query Frame = 1 Query: 187 WFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 WF VLASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W +RF E++ +VPF++LGNKID +A SE ELR LGL N TTG ++ RP+EVFM S Sbjct: 8 WFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCS 171
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.456e-31 Identity = 73/167 (43.71%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 184 DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVF 684 DWF L+ LGL++K+A I+F+GLDNAGK+TLL MLK+ PTQ PTS+EL +G I+FK FDLGGH++AR++W RF ES++ P L+L NK+DI A S E + G+ + TGKG NL S+ RPLEVF Sbjct: 5 DWFKSALSFLGLYKKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLR-SDQRPLEVF 170
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 63/175 (36.00%), Postives = 82/175 (46.86%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW-XXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MFL+DWFY + LG ++KEAKI+ +GL NAGKTTLLH+L L H PT P +E + G + FKA+DLGG Q R +W ESK P L+LG+K D + E L L + F G L +SN P ++ M S Sbjct: 1 MFLVDWFYNMFLWLGFFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRRFELG-----LNNSNNVPFDLIMTS 170
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 45/130 (34.62%), Postives = 62/130 (47.69%), Query Frame = 1 Query: 217 LWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIP-HAASEEELRY 603 L+ K + ILFLG+DNAGKTTL++ LK + + PT +P++ + IG +K + DLGGH AR W ERF E ++ P +VL NKID+ H E Y Sbjct: 31 LFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVRE--AYETVLSLEKRAPVVVLMNKIDLEGHTPETAEADY 158 The following BLAST results are available for this feature:
BLAST of FC931788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931788 ID=FC931788; Name=FC931788; organism=Citrus clementina; type=EST; length=694bpback to top |