FC931788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.078e-70 Identity = 134/174 (77.01%), Postives = 141/174 (81.03%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MF++DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK +VPFL+LGNKIDIP+AASE+ELRYHLGLSNFTTGKGKVNL DSNVRPLEVFM S Sbjct: 1 MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCS 174
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 8.731e-69 Identity = 132/174 (75.86%), Postives = 139/174 (79.89%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MF++DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK VPFL+LGNKIDIP+AASE+ELRYHLGLSNFTTGKGKV+L SNVRPLEVFM S Sbjct: 1 MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCS 174
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 4.333e-68 Identity = 130/174 (74.71%), Postives = 137/174 (78.74%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESK+ VPFL+LGNKIDIP+AASE+ELRYHLGL+NFTTGKGKV L DS VRPLEVFM S Sbjct: 1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCS 174
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.378e-66 Identity = 126/174 (72.41%), Postives = 136/174 (78.16%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MFL+DWFYGVLASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIG IKFKAFDLGGHQIARRVW ERF E+KK NVPFL+LGNKIDIP+AASE+ELRYHLGL+ TTGKG +NLA +NVRP+EVFM S Sbjct: 1 MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCS 174
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.180e-65 Identity = 129/176 (73.30%), Postives = 136/176 (77.27%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLA--DSNVRPLEVFMRS 693 MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVW ERF+ESKK VPFL+LGNKID P+AASE+ELRYHLGL+NFTTGKGKV A DS VRPLEVFM S Sbjct: 1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCS 176
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.686e-52 Identity = 113/179 (63.13%), Postives = 124/179 (69.27%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGN---KIDIPHAASEE-ELRYHLGLSNFT-TGKGKVNLADSNVRPLEVFMRS 693 MFL+DWFYG+LA+LGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW ERFAESKK FL L N +I+ P + RYH+G + + +GKVNLADSNVRP+EVFM S Sbjct: 1 MFLVDWFYGILATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMGANGASPLARGKVNLADSNVRPVEVFMCS 179
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.792e-45 Identity = 96/174 (55.17%), Postives = 117/174 (67.24%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MF+++WF+ +LA LGL K AKILFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG++KF +DLGGHQ ARR+W ERFAE++ +VPFL+LGNKID P A SEEELR +GL TTGKGKV L D +RP+E+FM S Sbjct: 1 MFIINWFWDILAQLGLAHKNAKILFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQ-TTGKGKVPLKD--IRPIEIFMCS 171
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44 Identity = 97/174 (55.75%), Postives = 114/174 (65.52%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 M++++WFY VL+SLGLW K AK+LFLGLDNAGKTTLLHMLK++R+ PT +PTSEELSIG KF FDLGGH ARRVW RFAESK VPFL+LGNKID+P A SE EL+ LGL TTGKGKV L + N+RP+E+FM S Sbjct: 1 MWIVNWFYDVLSSLGLWNKNAKLLFLGLDNAGKTTLLHMLKNDRMAVSNPTVHPTSEELSIGNCKFTTFDLGGHIQARRVWKDYFPEVNGIVFLVDAADPTRFAESKAELDSLLAIEQLKTVPFLILGNKIDMPQAVSELELKDALGLYQ-TTGKGKVPL-EGNIRPIEIFMCS 172
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.341e-44 Identity = 97/174 (55.75%), Postives = 115/174 (66.09%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 MF+++WF+ VLASLGL K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG +KF +DLGGH ARR+W ERFAESK VPFL+LGNKID A SEE+LR+ LGL TTGKGK+ L D +RP+EVFM S Sbjct: 1 MFIINWFWDVLASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLYQ-TTGKGKIPLRD--IRPIEVFMCS 171
BLAST of FC931788 vs. ExPASy Swiss-Prot
Match: SAR1_NEOFI (Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.363e-44 Identity = 97/174 (55.75%), Postives = 114/174 (65.52%), Query Frame = 1 Query: 172 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPHAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMRS 693 M++++WFY VLASLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEEL+IG +F FDLGGHQ ARR+W ERF ESK VPFL+LGNKID P A SE+ELR+ LGL TTGKGKV L +RP+EVFM S Sbjct: 1 MWIINWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVATLQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQ-TTGKGKVPL--EGIRPIEVFMCS 171 The following BLAST results are available for this feature:
BLAST of FC931788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931788 ID=FC931788; Name=FC931788; organism=Citrus clementina; type=EST; length=694bpback to top |