FC932379

Overview
NameFC932379
Unique NameFC932379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: S15A1_CANFA (Solute carrier family 15 member 1 OS=Canis familiaris GN=SLC15A1 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.203e-18
Identity = 55/177 (31.07%), Postives = 87/177 (49.15%), Query Frame = 2
Query:   71 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            G  +++ FI  NE CE+ +  G    +I Y    +      +      F     LTP++GA +AD++ G+F TI   SI+Y IG     +S+I           +    +     VA+  + L L A+G+GGI+PCV AFG DQF+E   KQ     ++F+ +Y  + A  L++  V
Sbjct:   11 GYPLSIFFIVVNEFCERFSYYGMRALLILYFRRFIGWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTAVSSI----NDLTDYNKDGTPDNLSVHVALSMIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQRN---RFFSIFYLAINAGSLISTIV 180          

HSP 2 Score: 24.2534 bits (51), Expect = 2.203e-18
Identity = 9/23 (39.13%), Postives = 15/23 (65.22%), Query Frame = 1
Query:  661 MFLSIIAFLIGYPLYRNLDPAGS 729
            M +S+I F+IG  +Y+   P G+
Sbjct:  209 MAVSLIVFVIGSGMYKKFQPQGN 231          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: S15A1_HUMAN (Solute carrier family 15 member 1 OS=Homo sapiens GN=SLC15A1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18
Identity = 54/177 (30.51%), Postives = 88/177 (49.72%), Query Frame = 2
Query:   71 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            G  +++ FI  NE CE+ +  G    +I Y T  +      +      F     LTP++GA +AD++ G+F TI   SI+Y IG    ++S+I                ++    V +  + L L A+G+GGI+PCV AFG DQF+E   KQ     ++F+ +Y  + A  L++  +
Sbjct:   11 GYPLSIFFIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVTSVSSI----NDLTDHNHDGTPDSLPVHVVLSLIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQRN---RFFSIFYLAINAGSLLSTII 180          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: S15A2_RAT (Solute carrier family 15 member 2 OS=Rattus norvegicus GN=Slc15a2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.179e-18
Identity = 52/174 (29.89%), Postives = 87/174 (50.00%), Query Frame = 2
Query:   80 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            +++ FI  NE CE+ +  G    +  Y    LH     + +    F      TP++GA +AD++ G+F TI   S++Y +G +  ++ AI      P   G+ +          +  V L L A+G+GGI+PCV AFG DQF+E   +  T   +YF+ +Y  + A  L++  +
Sbjct:   44 VSIAFIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVFKSLGAI------PILGGKML-------HTILSLVGLSLIALGTGGIKPCVAAFGGDQFEEEHAEART---RYFSVFYLAINAGSLISTFI 201          

HSP 2 Score: 22.3274 bits (46), Expect = 8.179e-18
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 1
Query:  661 MFLSIIAFLIGYPLYRNLDPAGS 729
            M L+++ F +G  +YR   P G+
Sbjct:  228 MVLALVVFAMGSKMYRKPPPEGN 250          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: S15A1_MOUSE (Solute carrier family 15 member 1 OS=Mus musculus GN=Slc15a1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.005e-17
Identity = 58/184 (31.52%), Postives = 95/184 (51.63%), Query Frame = 2
Query:   71 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVM--GAAILVAVTVLVYIQ 616
            G  +++ FI  NE CE+ +  G    ++ Y    L      +      F     LTP++GA +AD++ G+F TI   SI+Y IG   +++S+I   L      G     ++    VA+  V L L A+G+GGI+PCV AFG DQF+E   KQ     ++F+ +Y  +  G+ +   +T ++ +Q
Sbjct:   11 GYPLSIFFIVVNEFCERFSYYGMRALLVLYFRNFLGWDDNLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVISVSSI-NDLTDHDHNGSP---DSLPVHVALSMVGLALIALGTGGIKPCVSAFGGDQFEEGQEKQRN---RFFSIFYLAINGGSLLSTIITPILRVQ 187          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: S15A1_RAT (Solute carrier family 15 member 1 OS=Rattus norvegicus GN=Slc15a1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17
Identity = 56/177 (31.64%), Postives = 91/177 (51.41%), Query Frame = 2
Query:   71 GGMITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            G  +++ FI  NE CE+ +  G    ++ Y    L      +      F     LTP++GA +AD++ G+F TI   SI+Y IG   +++S+I   L     +G       +   VA+  + L L A+G+GGI+PCV AFG DQF+E   KQ     ++F+ +Y  + A  L++  +
Sbjct:   11 GYPLSIFFIVVNEFCERFSYYGMRALLVLYFRNFLGWDDDLSTAIYHTFVALCYLTPILGALIADSWLGKFKTIVSLSIVYTIGQAVISVSSI-NDLTDHDHDGSPNNLPLH---VALSMIGLALIALGTGGIKPCVSAFGGDQFEEGQEKQRN---RFFSIFYLAINAGSLLSTII 180          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: S15A2_MOUSE (Solute carrier family 15 member 2 OS=Mus musculus GN=Slc15a2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.797e-17
Identity = 52/174 (29.89%), Postives = 87/174 (50.00%), Query Frame = 2
Query:   80 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            +++ FI  NE CE+ +  G    +  Y    LH     + +    F      TP++GA +AD++ G+F TI   S++Y +G +  ++ AI      P   G+ +          +  V L L A+G+GGI+PCV AFG DQF+E   +  T   +YF+ +Y  + A  L++  +
Sbjct:   44 LSIAFIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVFKSLGAI------PILGGKML-------HTILSLVGLSLIALGTGGIKPCVAAFGGDQFEEEHAEART---RYFSVFYLSINAGSLISTFI 201          

HSP 2 Score: 22.3274 bits (46), Expect = 1.797e-17
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 1
Query:  661 MFLSIIAFLIGYPLYRNLDPAGS 729
            M L+++ F +G  +YR   P G+
Sbjct:  228 MVLALVVFAMGSKMYRKPPPEGN 250          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: S15A2_RABIT (Solute carrier family 15 member 2 OS=Oryctolagus cuniculus GN=SLC15A2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17
Identity = 53/174 (30.46%), Postives = 87/174 (50.00%), Query Frame = 2
Query:   80 ITMPFIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            +++ FI  NE CE+ +  G    +  Y    LH     + +    F      TP++GA +AD++ G+F TI   S++  +G +  ++SA        P  G +V          +  V L L A+G+GGI+PCV AFG DQF+E   K A +  +YF+ +Y  + A  L++  +
Sbjct:   44 LSIAFIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSWLGKFKTIIYLSLVNVLGHVIKSLSAF-------PILGGKVV------HTVLSLVGLCLIALGTGGIKPCVAAFGGDQFEE---KHAEERTRYFSGFYLAINAGSLISTFI 201          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: PEPT1_CAEEL (Peptide transporter family 1 OS=Caenorhabditis elegans GN=pept-1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 52/169 (30.77%), Postives = 84/169 (49.70%), Query Frame = 2
Query:   95 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            I SNE CE+ +  G  T +  YL   L    +++      F      TPL+G+ VAD Y G+FWTI   SI+Y IG + L +++             +  Q +    + +    LL+ A G+GGI+PCV AFG DQF+    +  +    +F+ +YF + A  +++  +
Sbjct:   51 IVSNEFCERFSYYGMRTVLTFYLLNVLKFTDSQSTIFFNGFTVLCYTTPLLGSIVADGYIGKFWTIFSVSILYAIGQVVLALAST------------KNFQSSVHPWMDLS--GLLIIAFGTGGIKPCVSAFGGDQFELGQERMLS---LFFSMFYFSINAGSMISTFI 202          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: PEPT2_CAEEL (Peptide transporter family 2 OS=Caenorhabditis elegans GN=pept-2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 2
Query:   95 IFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWK-YFNWYYFVMGAAILVAVTVLVYIQ 616
            I  NE+CE+ +  G    +  Y    L+   + +      F      +PL+G+ +AD Y G+FWTI   SI Y  G I L  S+I P                +     +  + LL+  +G+GGI+PCV AFG DQF    P   T+    +F+ +YF + A  L+++ +  Y +
Sbjct:   37 IVGNELCERFSFYGMRAVLTLYFFNILNFSQSFSTVLFHAFTVICYSSPLLGSILADGYIGKFWTIFFISIFYACGQILLAFSSIAP--------------SGSSHHPLLDLLGLLIVGLGTGGIKPCVSAFGGDQF----PAHYTRMISLFFSMFYFSINAGSLISMWLTPYFR 193          
BLAST of FC932379 vs. ExPASy Swiss-Prot
Match: PEPT3_CAEEL (Peptide transporter 3 OS=Caenorhabditis elegans GN=pept-3 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 2
Query:   92 FIFSNEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFRGTGSLTPLIGAFVADAYAGRFWTITIASIIYQIGMICLTISAILPKLRPPPCEGEQVCQEANKGQVAILYVSLLLAAIGSGGIRPCVVAFGADQFDETDPKQATKTWKYFNWYYFVMGAAILVAVTV 601
            F+  NE CE+ +  G  T +  YL T+     +KA      F     LTPLIG+ +AD+  GRF  I   S IY +G + L++ A+ P L  P              + ++ +  L + A  +G I+PCV AF ADQF E D K      ++F+++YF +    L A+ +
Sbjct:   19 FMLGNEFCERFSFYGMKTILFIYLITEHEFSPSKATFIYHLFTCIAYLTPLIGSIMADSVFGRFKVILYGSSIYVVGHVLLSLGAV-PFLSYPI-------------RSSLDFSGLFVIAFATGCIKPCVSAFAADQFTE-DQKDLRS--QFFSFFYFAINGGSLFAIII 171          
The following BLAST results are available for this feature:
BLAST of FC932379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
S15A1_CANFA2.203e-1831.07Solute carrier family 15 member 1 OS=Canis familia... [more]
S15A1_HUMAN7.696e-1830.51Solute carrier family 15 member 1 OS=Homo sapiens ... [more]
S15A2_RAT8.179e-1829.89Solute carrier family 15 member 2 OS=Rattus norveg... [more]
S15A1_MOUSE1.005e-1731.52Solute carrier family 15 member 1 OS=Mus musculus ... [more]
S15A1_RAT1.714e-1731.64Solute carrier family 15 member 1 OS=Rattus norveg... [more]
S15A2_MOUSE1.797e-1729.89Solute carrier family 15 member 2 OS=Mus musculus ... [more]
S15A2_RABIT2.239e-1730.46Solute carrier family 15 member 2 OS=Oryctolagus c... [more]
PEPT1_CAEEL4.223e-1630.77Peptide transporter family 1 OS=Caenorhabditis ele... [more]
PEPT2_CAEEL7.203e-1629.71Peptide transporter family 2 OS=Caenorhabditis ele... [more]
PEPT3_CAEEL2.096e-1532.35Peptide transporter 3 OS=Caenorhabditis elegans GN... [more]

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Properties
Property NameValue
Genbank descriptionC34208A03EF PostHarveN Citrus clementina cDNA clone C34208A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932379 ID=FC932379; Name=FC932379; organism=Citrus clementina; type=EST; length=735bp
GATCCACACACAGAAAATGATAGAAAATATGGAGGAAAAAGGAAGCAACA
GCCATGTCAAAAGACAAAAGGGTGGCATGATCACCATGCCCTTCATTTTT
TCAAATGAGGTCTGCGAGAAGTTAGCTGTGGTGGGGTTTAACACTAATAT
GATTAGCTACTTAACGACACAACTGCACATGCCATTAACCAAAGCTGCCA
ACACTCTCACCAACTTTAGAGGAACCGGCAGCTTGACTCCGTTGATCGGA
GCCTTCGTCGCCGATGCTTACGCCGGTCGCTTTTGGACTATAACTATAGC
TTCCATCATTTATCAAATTGGAATGATTTGCTTGACAATCTCAGCAATTC
TACCAAAACTAAGGCCACCGCCATGTGAAGGTGAACAAGTTTGCCAAGAA
GCTAATAAAGGACAGGTAGCAATCTTATATGTCTCCCTTCTCCTCGCTGC
TATCGGGTCGGGTGGAATCCGACCCTGTGTGGTGGCATTTGGCGCGGACC
AATTTGACGAGACGGACCCCAAACAAGCAACAAAGACATGGAAATATTTT
AATTGGTATTATTTTGTCATGGGGGCAGCAATACTAGTGGCTGTGACAGT
TCTTGTTTATATTCAAGATAATATTGGATGGGGATGGGGCCTCGGTATTC
CACTTTTGCCATGTTTCTTTCAATCATTGCGTTCTTGATCGGGTACCCAC
TTTACCGGAACTTGGATCCGGCTGGGAGTCCGTTT
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