FC932388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.152e-26 Identity = 82/230 (35.65%), Postives = 125/230 (54.35%), Query Frame = 1 Query: 7 PESVLKKQKRNEEWAL-----AKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDP---------EAKLLFIIRI----RGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRG-YGKLDKQ----RIA-LTDNSIIEKALG-KFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 PE +L+K+K N+ L A++++LE KKN S+K + RA+ + E ++K K + D AKLLFIIRI +G+ + K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+R+L KR +D++ RI L +N ++E G G IC+EDLI E+ T+G HFK +++ PFKL AP+ G Sbjct: 8 PEILLRKRKNNDRKRLEKQEQARQRQLEQKKKNDQRSKKFV--RAETLVSNYKSNELENKRIKHITKFEKQSQADKISQAKEDDESAKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPFKLNAPVSG 234
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24 Identity = 75/212 (35.38%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 40 EEWALAKKQELETSK-KNKLE----SRKLIYNRAKQYAKEFAEQEKVLIQLKR-----DAKLKGGFYVDPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 E+ + + ++LE K KN L R I +++ A A E L + D ++ D E LLF+IR++G A I K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S+R LI KR + + I L DN+I+E+ LG G+IC+ED+I EI T+G +F + FL PFKL + G Sbjct: 64 EKTRIRRVRDLENQKVKNDLSHIPSDRDFILRISEREAGSKATSESELQDVDEEDEEDDGLIREKIVYDGEPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPFKLNREVSG 275
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 63/144 (43.75%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 214 DPEAKLLFIIRIRGINAIDPKTK--KILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 D + LLFI+R+RG A++ K KIL LLRL + GVF+K+ K +L + PYV G P+L S+R LI KRG + + I L DN+I+E+ LG GIIC+ED+I EI T+G F FL PFKL + G Sbjct: 136 DGKPALLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPFKLNREVSG 279
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23 Identity = 83/261 (31.80%), Postives = 129/261 (49.43%), Query Frame = 1 Query: 7 PESVLKKQKRNEEWALAKKQEL-----ETSKKNKLESRKLIYNRAKQYAKEFA---EQEKVL-IQLKRDAKLKG---------GFYV------------------------------DPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRG---YGKLDKQR---IALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 PE +L+K +RN + +KQEL E KK +++++K A A E+E++ I KLKG F++ + E +LLF++R++G A I K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS+R LI KR Y + D++ I L DN+I+E+ LG G+IC++D+I EI T+G +F + FL PFKL + G Sbjct: 15 PEILLRK-RRNADRTRLEKQELARQRQEQRKKEQIKNKKKFIRAESLVANSLATSREKERIKRISKLEHKKLKGDVSHLPSEKNFFLKVTEKPQSEETDDLIDEDEEDGFEREKVAYNGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPFKLNREVSG 274
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.530e-23 Identity = 79/244 (32.38%), Postives = 115/244 (47.13%), Query Frame = 1 Query: 7 PESVLKKQKRNEEWALAKKQELETSK------KNKLESRKLIYNRAKQYAKEFAEQEKVLIQL--KRDAKLKGGFYV-----------------------DPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 PE +L+K +RN E +KQE + + + K + A + E+EK IQ KR AK + G D A LLF++R+RG A I K ++L LLRL ++ GVF+++ +L V PYV G P+L S+R L+ KR G+ + L DN ++E+ LG G+IC+ED+I EI T+G F + FL PFKL + G Sbjct: 8 PEILLRK-RRNAERTRVEKQEAARRRAEAEVRQRRARQHKFVRAEALVASTLATEREKTRIQRVSKRAAKQRAGHVTGGEWLVRVRAAADGGLEREKTAYDGRATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPFKLGREVSG 250
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.009e-22 Identity = 60/205 (29.27%), Postives = 113/205 (55.12%), Query Frame = 1 Query: 7 PESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 P+S ++K++ + + ++ + ++ K + + ++ ++ EQE+ +++ K + +K GFYV EA+ +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +R+L+Y +G G+ R+ LT+ I + GK I C+E+L+ I FK+ FL+PF L P GG Sbjct: 9 PQSSIRKKEYEARMSRIRSRQEKEFRERKSANARYAEETTEKLLNKYYEQEREILEKK--SSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGG 209
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.775e-18 Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 229 LLFIIRIRG-INA-IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKL------DKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 L I+R G + A I K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++VR+L+ KR + + +++ L DN+++E+ LG GIIC+ED+I E + FK HFL PF+L + G Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPFELNKDVVG 170 The following BLAST results are available for this feature:
BLAST of FC932388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932388 ID=FC932388; Name=FC932388; organism=Citrus clementina; type=EST; length=624bpback to top |