FC932388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 4.740e-97 Identity = 173/207 (83.57%), Postives = 192/207 (92.75%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPESVLKK+KR EEWALAKKQELE +KK E RKLI+NRAKQY+KE+ E+E+ LIQLKR+AKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRG+GKL+ QR ALTDNSI+++ LGK GIIC+EDLI EIMTVGPHFKEA +FLWPF+LKAPLGG+ Sbjct: 10 VPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGM 216
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=1 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 2.353e-96 Identity = 173/207 (83.57%), Postives = 191/207 (92.27%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPESVLKK+KR EEWAL KKQ +E +KK E+RKLI+ RA+QY+KE+AE+EK LI LKR+AKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNML RVEPYVTYG+PNLKSV+ELIYKRGYGKL+ QRIALTDNSI+E+ALGK GIIC EDLI EI+TVGPHFKEA +FLWPF+LKAPLGGL Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFKEANNFLWPFQLKAPLGGL 214
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 1.992e-95 Identity = 172/207 (83.09%), Postives = 191/207 (92.27%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPESVLKK KR EEWALAKK E +KK +E+RKLI+ RA+QYAKE+AE++ LI+LKR+AKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NML RVEPYVTYGYPNLKSV+ELIYKRGYGKL+ QRIALTDNSI+++ALGK GIIC+EDLI EIMTVGPHFKEA +FLWPF+LKAPLGGL Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHFKEANNFLWPFQLKAPLGGL 214
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 1.345e-67 Identity = 126/206 (61.17%), Postives = 160/206 (77.67%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGG 621 VPE++LKK+K E+ ++ E+E K E R +I+ RA+ Y KE+ + E+ I+L+R AK G F++ EAKL+F+IRI+GIN I PK +KILQLLRL QI NGVF++V KAT M+ VEP+V YGYPNLKSV+ELIYKRGYGK++KQR+ALTDNSIIE+ LGK+GIICMEDLI EI TVGP+FK+A +FLWPFKL P GG Sbjct: 13 VPETLLKKRKSQEKARAERQAEIEKKKAANKEKRAVIFKRAETYVKEYRDVEREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEENLGKYGIICMEDLIHEIYTVGPNFKQASNFLWPFKLSNPTGG 218
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_MOUSE (60S ribosomal protein L7 OS=Mus musculus GN=Rpl7 PE=2 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 2.537e-66 Identity = 127/210 (60.48%), Postives = 160/210 (76.19%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWA---LAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPE++ KK++ E L KK L+T +K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDNS+I ++LGKFGIICMEDLI EI TVG FKEA +FLWPFKL +P GG+ Sbjct: 36 VPETLKKKRRNFAELKVKRLRKKFALKTLRKAR---RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGM 242
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_RAT (60S ribosomal protein L7 OS=Rattus norvegicus GN=Rpl7 PE=1 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 3.313e-66 Identity = 126/210 (60.00%), Postives = 160/210 (76.19%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWA---LAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPE++ KK++ E L KK L+T +K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDNS++ ++LGKFGIICMEDLI EI TVG FKEA +FLWPFKL +P GG+ Sbjct: 26 VPETLKKKRRNFAELKVKRLRKKFALKTLRKAR---RKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLVARSLGKFGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGM 232
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_BOVIN (60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 4.327e-66 Identity = 121/207 (58.45%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPE++ KK+K E + + ++ K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLI EI TVG FKEA +FLWPFKL +P GG+ Sbjct: 14 VPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGM 220
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_PONAB (60S ribosomal protein L7 OS=Pongo abelii GN=RPL7 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 9.640e-66 Identity = 120/207 (57.97%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPE++ KK++ E + + ++ K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLI EI TVG FKEA +FLWPFKL +P GG+ Sbjct: 13 VPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGM 219
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_MACFA (60S ribosomal protein L7 OS=Macaca fascicularis GN=RPL7 PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 9.640e-66 Identity = 120/207 (57.97%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPE++ KK++ E + + ++ K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLI EI TVG FKEA +FLWPFKL +P GG+ Sbjct: 13 VPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEICTVGKRFKEANNFLWPFKLSSPRGGM 219
BLAST of FC932388 vs. ExPASy Swiss-Prot
Match: RL7_HUMAN (60S ribosomal protein L7 OS=Homo sapiens GN=RPL7 PE=1 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 9.640e-66 Identity = 120/207 (57.97%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 4 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKRDAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIREIMTVGPHFKEAKHFLWPFKLKAPLGGL 624 VPE++ KK++ E + + ++ K + RKLIY +AK Y KE+ + + I++ R A+ G FYV E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ +GYPNLKSV ELIYKRGYGK++K+RIALTDN++I ++LGK+GIICMEDLI EI TVG FKEA +FLWPFKL +P GG+ Sbjct: 14 VPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGM 220 The following BLAST results are available for this feature:
BLAST of FC932388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC932388 ID=FC932388; Name=FC932388; organism=Citrus clementina; type=EST; length=624bpback to top |