BQ623478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.285e-59 Identity = 93/121 (76.86%), Postives = 101/121 (83.47%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 365 KGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVRKW K LVNSKE P+FEQP+MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG Sbjct: 317 KGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437 HSP 2 Score: 61.2326 bits (147), Expect = 2.285e-59 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 1 Query: 400 GGKAAQQM-NVSVPEGCTDPTAENFDPPAKSDDGSCQY 510 GG+AAQQ+ NV VPEGCTDP A N+DP A+SDDGSC Y Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 7.821e-57 Identity = 87/121 (71.90%), Postives = 103/121 (85.12%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 365 KGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVRKW K LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN DA+++G+FYG Sbjct: 308 KGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428 HSP 2 Score: 59.6918 bits (143), Expect = 7.821e-57 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 403 GKAAQQM-NVSVPEGCTDPTAENFDPPAKSDDGSCQYT 513 G+ AQQ N+ VPEGCTDP A+NFDP A+SDDGSC YT Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 8.508e-56 Identity = 84/121 (69.42%), Postives = 104/121 (85.95%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 365 KGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVRKW K LVNS++ TFEQP+MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN+DA+++G+FYG Sbjct: 307 KGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427 HSP 2 Score: 58.5362 bits (140), Expect = 8.508e-56 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1 Query: 403 GKAAQQMNVSVPEGCTDPTAENFDPPAKSDDGSCQYT 513 GK AQQ + VPEGCTD A+N+DP A+SDDGSC YT Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 3.203e-55 Identity = 85/121 (70.25%), Postives = 94/121 (77.69%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 365 KGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVRK+ K LVNS+E P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+AN DAI G FYG Sbjct: 317 KGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437 HSP 2 Score: 65.0846 bits (157), Expect = 3.203e-55 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 403 GKAAQQMNVSVPEGCTDPTAENFDPPAKSDDGSCQY 510 GK AQQ+N+ VPEGCTDP AENFDP A+SDDG+C Y Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 8.389e-53 Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 3 Query: 6 GIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 365 GIF+ D V + +VKLVD FPGQSIDFFGALRARVY DEVRKW K LVNSK+ P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN+DAI G F+G Sbjct: 316 GIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435 HSP 2 Score: 58.9214 bits (141), Expect = 8.389e-53 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 403 GKAAQQMNVSVPEGCTDPTAENFDPPAKSDDGSCQY 510 GKAAQQ+++ V +GCTDP A+N+DP A+SDDGSC Y Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 5.361e-49 Identity = 95/120 (79.17%), Postives = 103/120 (85.83%), Query Frame = 3 Query: 6 GIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 365 GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVRKW K LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN DA+ +G FYG Sbjct: 318 GIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 8.560e-47 Identity = 89/121 (73.55%), Postives = 104/121 (85.95%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFYG 365 KGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVRKW K LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN+DA+++G FYG Sbjct: 304 KGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 1.907e-46 Identity = 89/120 (74.17%), Postives = 102/120 (85.00%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 362 KGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVRKW K LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG ANEDAI+SG+F+ Sbjct: 319 KGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 7.246e-46 Identity = 88/119 (73.95%), Postives = 101/119 (84.87%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNF 359 KGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVRKW K LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN+DAI+ G F Sbjct: 317 KGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 177.563 bits (449), Expect = 3.044e-44 Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 3 Query: 3 KGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWXXXXXXXXXXKSLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANEDAIQSGNFY 362 KGIFR D V ++ +V+LVDTFPGQSIDFFGALRARVYDDEVR+W + LVNSKE PTFEQP++T+EKLLEYG+M+V EQENVKRVQLADKYL+EAALGEANEDA+++G+F+ Sbjct: 313 KGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432 The following BLAST results are available for this feature:
BLAST of BQ623478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623478 ID=BQ623478; Name=BQ623478; organism=Citrus sinensis; type=EST; length=515bpback to top |