CB304739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470 PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 2.169e-45 Identity = 94/108 (87.04%), Postives = 98/108 (90.74%), Query Frame = -1 Query: 182 ISKDGGGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 505 ISKD GG E K+VETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 31 ISKDAGGSEKKKKKSKKSVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720 PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 8.242e-45 Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = -1 Query: 179 GGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 490 GGVE K+ ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 48 GGVEKKKKRVKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSJ (Histone H2B.11 OS=Oryza sativa subsp. japonica GN=H2B.11 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.076e-44 Identity = 93/108 (86.11%), Postives = 99/108 (91.67%), Query Frame = -1 Query: 179 SKDGGGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 +K+GGG + K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 32 AKEGGGEKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSI (Histone H2B.11 OS=Oryza sativa subsp. indica GN=H2B.11 PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.076e-44 Identity = 93/108 (86.11%), Postives = 99/108 (91.67%), Query Frame = -1 Query: 179 SKDGGGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 502 +K+GGG + K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 32 AKEGGGEKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 1.836e-44 Identity = 94/109 (86.24%), Postives = 99/109 (90.83%), Query Frame = -1 Query: 179 ISKDGGGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 505 I+K+GG E KN+ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS Sbjct: 31 ITKEGGS-EKKKKKSKKNIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS 138
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3) HSP 1 Score: 177.948 bits (450), Expect = 3.132e-44 Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = -1 Query: 179 ISKDGGGV--EXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 505 + K+GG + K+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 37 LPKEGGAAAGDKKKKRVKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3) HSP 1 Score: 177.948 bits (450), Expect = 3.132e-44 Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = -1 Query: 179 ISKDGGGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 505 + KD G + K++ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 37 LPKDAGRPDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 177.948 bits (450), Expect = 3.132e-44 Identity = 95/111 (85.59%), Postives = 99/111 (89.19%), Query Frame = -1 Query: 179 ISKDGGGV--EXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 505 + K+GG E K+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 38 LPKEGGSAAGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.091e-44 Identity = 94/109 (86.24%), Postives = 96/109 (88.07%), Query Frame = -1 Query: 179 ISKDGGGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 505 + KD + K VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 29 LPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137
BLAST of CB304739 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5) HSP 1 Score: 177.563 bits (449), Expect = 4.091e-44 Identity = 93/105 (88.57%), Postives = 96/105 (91.43%), Query Frame = -1 Query: 179 GGGVEXXXXXXXKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 493 G G + K+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 46 GAGGDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150 The following BLAST results are available for this feature:
BLAST of CB304739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304739 ID=CB304739; Name=CB304739; organism=Citrus sinensis; type=EST; length=586bpback to top |