CB304801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD_ARATH (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=IVD PE=1 SV=2) HSP 1 Score: 330.487 bits (846), Expect = 5.305e-90 Identity = 158/176 (89.77%), Postives = 170/176 (96.59%), Query Frame = -3 Query: 170 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQQ 697 GSDTCELVFENCFVP EN+L +EGKGVYV+MSGLDLERLVLAAGPLGIMQAC+D VLPY+RQREQFGRP+GEFQFIQGK ADMYTALQSSRSYVYSVARDCDNGKVDPKDCAG ILCAAERATQVALQAIQCLGGNGY+NEYATGRLLRDAKLYEIGAGTSEIRR++IGR+L K++ Sbjct: 234 GSDTCELVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKLYEIGAGTSEIRRIVIGRELFKEE 409
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD1_SOLTU (Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum GN=IVD1 PE=2 SV=1) HSP 1 Score: 321.242 bits (822), Expect = 3.218e-87 Identity = 152/176 (86.36%), Postives = 167/176 (94.89%), Query Frame = -3 Query: 170 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQQ 697 GSDTCELVFENCFVP ENVLGQEGKGVYV+MSGLDLERLVLAAGP+GIMQAC+D+V+PYVRQREQFGRP+GEFQ IQGK ADMYTALQSSRSYVY+VA+DCDNGK+DPKDC+G IL AAERATQVALQAIQCLGGNGY+NEY TGRLLRDAK+YEI AGTSEIRR++IGR+L K Q Sbjct: 237 GSDTCELVFENCFVPKENVLGQEGKGVYVLMSGLDLERLVLAAGPVGIMQACMDIVIPYVRQREQFGRPIGEFQLIQGKLADMYTALQSSRSYVYAVAKDCDNGKIDPKDCSGTILLAAERATQVALQAIQCLGGNGYINEYPTGRLLRDAKMYEIAAGTSEIRRLVIGRELFKHQ 412
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD2_SOLTU (Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum tuberosum GN=IVD2 PE=1 SV=1) HSP 1 Score: 315.464 bits (807), Expect = 1.766e-85 Identity = 151/176 (85.80%), Postives = 167/176 (94.89%), Query Frame = -3 Query: 170 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLKQQ 697 GSDTCELVFENCFVP ENVLGQ GKGVYV+MSGLDLERLVLA+GP+GIMQAC+DVVLPYV+QREQFGRP+GEFQF+QGK ADMYT++QSSRSY+YSVAR+CD+G ++ KDCAGVIL AAERATQVALQAIQCLGGNGYVNEY TGR LRDAKLYEIGAGTSEIRRMIIGR+L K+Q Sbjct: 226 GSDTCELVFENCFVPEENVLGQVGKGVYVLMSGLDLERLVLASGPVGIMQACLDVVLPYVKQREQFGRPIGEFQFVQGKVADMYTSMQSSRSYLYSVARECDSGTINTKDCAGVILSAAERATQVALQAIQCLGGNGYVNEYPTGRFLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 401
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD_MOUSE (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.398e-66 Identity = 121/170 (71.18%), Postives = 141/170 (82.94%), Query Frame = -3 Query: 188 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGR 697 GS+TCELVFE+C VP NVL QE KGVYV+MSGLDLERLVLA GPLGIMQA +D +PY+ RE FG+ +G+FQ +QGK ADMYT L +SR YVY+VA+ CD G + PKDCAGVIL AAE ATQVAL IQCLGGNGY+N++ GR LRDAKLYEIGAGTSE+RR++IGR Sbjct: 248 GSNTCELVFEDCKVPAANVLSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMASRQYVYNVAKACDEGHIIPKDCAGVILYAAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 417
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD_RAT (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ivd PE=1 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 2.244e-64 Identity = 117/170 (68.82%), Postives = 137/170 (80.59%), Query Frame = -3 Query: 188 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGR 697 GS+TCELVFE+C VP N+L QE KGVYV+MSGLDLERLVLA GPLGIMQA +D +PY+ RE FG+ +G+FQ +QGK ADMYT L + R YVY+VAR CD G + KDCAGVIL AE ATQVAL IQCLGGNGY+N++ GR LRDAKLYEIG GTSE+RR++IGR Sbjct: 248 GSNTCELVFEDCKVPAANILSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMACRQYVYNVARACDEGHITAKDCAGVILYTAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGGGTSEVRRLVIGR 417
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD_BOVIN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.000e-64 Identity = 117/170 (68.82%), Postives = 137/170 (80.59%), Query Frame = -3 Query: 188 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGR 697 GS+TCELVFE+C VP N+LG GKGVYV+MSGLDLERLVLA GPLGIMQA +D +PY+ RE FG+ +G FQ +QGK ADMYT L + R YVY+VA+ CD G KDCAGVIL +AE ATQVAL IQCLGGNGY+N++ GR LRDAKLYEIGAGTSE+RR++IGR Sbjct: 250 GSNTCELVFEDCEVPAANILGHLGKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTTKDCAGVILYSAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 419
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD_PONAB (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.241e-63 Identity = 114/170 (67.06%), Postives = 136/170 (80.00%), Query Frame = -3 Query: 188 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGR 697 GS+TCEL+FE+C VP N+LG E KGVYV+MSGLDLERLVLA GPLG+MQA +D +PY+ RE FG+ +G FQ +QGK ADMYT L + R YVY+VA+ CD G KDCAGVIL +AE ATQVAL IQC GGNGY+N++ GR LRDAKLYEIGAGTSE+RR++IGR Sbjct: 247 GSNTCELIFEDCKVPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 416
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: IVD_HUMAN (Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63 Identity = 113/170 (66.47%), Postives = 136/170 (80.00%), Query Frame = -3 Query: 188 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGR 697 GS+TCEL+FE+C +P N+LG E KGVYV+MSGLDLERLVLA GPLG+MQA +D +PY+ RE FG+ +G FQ +QGK ADMYT L + R YVY+VA+ CD G KDCAGVIL +AE ATQVAL IQC GGNGY+N++ GR LRDAKLYEIGAGTSE+RR++IGR Sbjct: 247 GSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGR 416
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACDC_BACSU (Probable acyl-CoA dehydrogenase yngJ OS=Bacillus subtilis GN=yngJ PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 79/174 (45.40%), Postives = 108/174 (62.07%), Query Frame = -3 Query: 176 GSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 697 GS+T E++ E+ VP N+LG KG + LD R+ +AA +GI QA +D L Y ++R+QFG+P+ FQ IQ K ADM + +R V A D+ + K+ A L A+E AT+ QAIQ GG+GY+ EY R+LRDAKL EIG GTSEI+R++I R+LLK Sbjct: 207 GSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTLDGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLKDHNRPFTKEAAYAKLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLLK 380
BLAST of CB304801 vs. ExPASy Swiss-Prot
Match: ACADS_RAT (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.328e-32 Identity = 78/173 (45.09%), Postives = 104/173 (60.12%), Query Frame = -3 Query: 176 SDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACIDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRKLLK 694 S T L+FE+C +P EN+LG+ G G + M LD+ R+ +A+ LGI QA +D + Y R FG PL + Q IQ K ADM AL+S+R + A DN K K+ A L A+E AT ++ QAIQ LGG GYV E R RDA++ EI GTSEI+R++I LL+ Sbjct: 236 SSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVIAGHLLR 408 The following BLAST results are available for this feature:
BLAST of CB304801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304801 ID=CB304801; Name=CB304801; organism=Citrus sinensis; type=EST; length=699bpback to top |