CB304885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA1_MAIZE (60S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19 Identity = 43/61 (70.49%), Postives = 54/61 (88.52%), Query Frame = -3 Query: 410 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 592 M++ ELAC YA LIL DDGIAIT +KIA +VKAAN+ +ESYWP+LFAKLLEKRN++DLI++ Sbjct: 1 MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILS 61
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA11_ARATH (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana GN=RPP1A PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.085e-18 Identity = 44/60 (73.33%), Postives = 50/60 (83.33%), Query Frame = -3 Query: 410 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 589 + ELAC+YA +IL D+GIAIT DKIA LVKAA VSIESYWP LFAK+ EKRN+ DLIMN Sbjct: 3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA13_ARATH (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana GN=RPP1C PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18 Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = -3 Query: 410 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 589 + ELAC+YA +IL D+GIAIT DKIA LVKAA V+IESYWP LFAK+ EKRN+ DLIMN Sbjct: 3 TVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA12_ARATH (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana GN=RPP1B PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18 Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = -3 Query: 410 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 589 + ELAC+YA +IL D+GIAIT+DKIA LVKAA V IESYWP LFAK+ EKRN+ DLIMN Sbjct: 3 TVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA1_CHLRE (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.899e-17 Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = -3 Query: 410 MSASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 592 MS SELACTYA LILHDDG+ IT D I + KAA V +E YWP+LFAKL K+++DDLI N Sbjct: 1 MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLITN 61
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.029e-13 Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 410 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 589 S SELAC Y+ LILHDD + +T DKI L+KAA VS+E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.749e-13 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 410 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 589 S SELAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.749e-13 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 410 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 589 S SELAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA1_BOVIN (60S acidic ribosomal protein P1 OS=Bos taurus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.749e-13 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = -3 Query: 410 SASELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 589 S SELAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI N Sbjct: 3 SVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB304885 vs. ExPASy Swiss-Prot
Match: RLA1_DROME (60S acidic ribosomal protein P1 OS=Drosophila melanogaster GN=RpLP1 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 8.814e-13 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = -3 Query: 410 SELACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 583 +ELAC YA LIL DD +A+T +KI ++KAANV +E YWP LFAK LE N+ DLI N Sbjct: 5 AELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITN 62 The following BLAST results are available for this feature:
BLAST of CB304885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304885 ID=CB304885; Name=CB304885; organism=Citrus sinensis; type=EST; length=603bpback to top |