CB304894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.557e-57 Identity = 104/196 (53.06%), Postives = 145/196 (73.98%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF+ FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+NDK+VFVGH + K++R++ +K F NV++KNLD D++ +K+F ++G ITSA + RD +GKS+ FGFVNF + A AV+ +N K+ ++ YVG+A Sbjct: 115 LNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRA 310 HSP 2 Score: 108.997 bits (271), Expect = 1.970e-23 Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = -2 Query: 156 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE------------TVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD 545 K+ N++IKNLD ID F FG I S ++ D G+S+GFGFV F ESAQ A++++N I ++++VG +K ERE A K + N++VKNL + DE L+++FG YGTITSA VMRD Sbjct: 231 KANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRELFGPYGTITSAKVMRD 372
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 6.067e-57 Identity = 110/196 (56.12%), Postives = 146/196 (74.49%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 +NF + K IRIM+S RDPS+RKSG GN+FIKNLDKSID+KAL+DTFS FGNILSCK+ D +G SKG+ FV FE +E+A AI+K+NGML+ND++VFVG F ++ERE + K K F NV++KN E DE LK++F ++G S VMRD +GKSK FGFV++E +DA KAV+ +NGK+ + +VG+A Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRA 266 HSP 2 Score: 136.732 bits (343), Expect = 8.823e-32 Identity = 74/179 (41.34%), Postives = 110/179 (61.45%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N++IKN + +D ++L + FS FG LS K+ D +G+SKGFGFV +E E A A++++NG I+ K +FVG +K ER+ +K KF N+++KNLD++ DE L+K F +G+ITSA VM + DG+SK FGFV F + ++A KAV +NG+ + YV A Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQ-AELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALA 368 HSP 3 Score: 77.0258 bits (188), Expect = 8.296e-14 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = -2 Query: 285 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 530 N++IKNLD +ID + L FSPFG+I S K+ + G+SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERK 375
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3) HSP 1 Score: 219.935 bits (559), Expect = 7.924e-57 Identity = 107/196 (54.59%), Postives = 145/196 (73.98%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+T + K RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF+ FGNILSCK+A D G SKG+GFV +E E+A NAI +NGML+N+K+VFVGH + K+ER + +K F N++VKN+D TDED +++F ++G ITSA + RD GKS+ FGFVN+ + AA AVD LN +F ++ YVG+A Sbjct: 109 LNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRA 304 HSP 2 Score: 102.834 bits (255), Expect = 1.412e-21 Identity = 73/236 (30.93%), Postives = 108/236 (45.76%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSA-VVMRD-----------------------------------------GD-----------GKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ NI++KN+D + + + F G+I S IA D G+S+GFGFV + E+A A+D LN + ++++VG +K ERE K +K+ N+++KNL++ DE L+ +F +GTITSA V++RD GD GKSK FGFV F N D+A KAV +N K + + YV A Sbjct: 225 KANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALA 460
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.352e-56 Identity = 103/196 (52.55%), Postives = 147/196 (75.00%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+T + + RIM+S RDPS+RK GTGN+FIKNLD +ID+KALHDTFS FG ILSCK+A D G +KG+GFV F++ ESA AI+ +NGML+NDK+V+VGH + ++ER++ A+K F NV++KNLD T+++ +FG++G ITS +++D + K + FGFVN+ N + A KAVD LN K++ ++ YVG+A Sbjct: 141 LNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRA 336 HSP 2 Score: 124.79 bits (312), Expect = 3.469e-28 Identity = 72/183 (39.34%), Postives = 98/183 (53.55%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK-------TKFN-----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ N++IKNLD I + D F FG I S + D + + +GFGFV + N E AQ A+D+LN K+++VG +K ERE K K N N+F+KNL + DE LK F +GTITSA +M D GKSK FGFV + ++A KAV +N + + YV A Sbjct: 257 KANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 439 HSP 3 Score: 93.5893 bits (231), Expect = 8.565e-19 Identity = 57/190 (30.00%), Postives = 97/190 (51.05%), Query Frame = -2 Query: 39 TPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVG 605 TP N S+ PS + ++++ LD S+ L + F+ G + S ++ D + +S G+ +V F N E + A+D+LN LI + + +R+ K NVF+KNLD + ++ L F +G I S V D G +K +GFV+F++V+ A A++ +NG +D++ YVG Sbjct: 62 TPTNASSVAT------PSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRI----MWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVG 241 HSP 4 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = -2 Query: 282 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 530 N+FIKNL +D + L FS FG I S KI TD G+SKGFGFV + E A A+ ++N ++ K ++V RK+ R + Sbjct: 365 NLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKEVRRS 447
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.765e-56 Identity = 106/196 (54.08%), Postives = 146/196 (74.49%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+ P+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS FG ILSCK+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K F N++VKN+D + ++E +K+F +G ITS + +D DGKSK FGFVNFE+ + A KAV+ LN K+ + ++ YVG+A Sbjct: 113 LNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRA 308 HSP 2 Score: 131.724 bits (330), Expect = 2.838e-30 Identity = 75/183 (40.98%), Postives = 109/183 (59.56%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAI----KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ NI++KN+D + ++ FSPFG I S + D G+SKGFGFV FE+ ESA A+++LN IN ++++VG +K+ER E V + K + N+FVKNLD++ E L++ F +GTITSA VM D GKSK FGFV F ++A KA+ +N + + + YV A Sbjct: 229 KANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALA 411 HSP 3 Score: 78.5666 bits (192), Expect = 2.851e-14 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = -2 Query: 282 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 530 N+F+KNLD +ID + L + F PFG I S K+ D +G+SKGFGFV F E A AI ++N +IN K ++V RK R + Sbjct: 337 NLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDVRRS 419
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3) HSP 1 Score: 217.624 bits (553), Expect = 3.933e-56 Identity = 113/197 (57.36%), Postives = 143/197 (72.59%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE-TVAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF-DDREWYVGKA 614 +NF + NK IRIM+S RDPS+R+SG GN+FIKNLD++ID+KA++DTFS FGNILSCK+ATD G SKG+GFV FE +E+A +IDK+NGML+N K+V+VG F+ ++ERE + K K F NV+VKN E DE LK+ F YG ITS VM DGKSK FGFV FE + A AV ALNGK + + YV +A Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARA 259 HSP 2 Score: 122.479 bits (306), Expect = 1.722e-27 Identity = 70/180 (38.89%), Postives = 101/180 (56.11%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N+++KN + D + L + F P+G I S K+ + G+SKGFGFV FE E+A+ A+ LNG + + K ++V +K ER+ +K KF N++VKNLD++ D+ L+ F YG ITSA VM D +G+SK FGFV F +A AV LNG+ + YV A Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQ-ELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALA 362 HSP 3 Score: 80.1073 bits (196), Expect = 9.800e-15 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = -2 Query: 285 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 530 N+++KNLD +ID L FSP+GNI S K+ TD G+SKGFGFV F A A+ +LNG ++ K ++V RK+ER+ Sbjct: 288 NLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERK 369
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 6.708e-56 Identity = 101/196 (51.53%), Postives = 147/196 (75.00%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+T + + RIM+S RDP++RK+G GN+FIKNLD +ID+KALHDTF+ FGNILSCK+A D +G SKG+GFV +E E+A AI +N ML+N+K+V+VG+ + K++R++ +K F N++VKN+ TDE+ + +F +YG +TS+ + RD +GKS+ FGFVNF + AAKAV+ LNGK+F ++ YVG+A Sbjct: 126 LNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRA 321 HSP 2 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 74/228 (32.46%), Postives = 106/228 (46.49%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT-------KFN-----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD------------------------------------------GD---GKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ NI++KN+ + D F+ +G++ S +A D G+S+GFGFV F E A A+++LNG + ++VG +K ERE K+ K N N+++KNL + D+ L+++F EYG ITSA VMRD GD GKSK FGFV F N DDA KAV +N + + + YV A Sbjct: 242 KANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKKTEKKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALA 469
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PAP1A_DICDI (Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.144e-55 Identity = 108/194 (55.67%), Postives = 134/194 (69.07%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN TP+ K+ RIM+S RDPS+RKSG GN+FIKNLDK IDHKAL+DTFS FGNILSCK+ TD SKGFGFV +E +ESA AI K+NGM+IN ++VFVG F +ER + KF NVF KNL E + LK++ +YG IT+ +M D GKSK FGF NFE+ + A V+ NGK F + Y G+A Sbjct: 71 LNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQ-PTEVKFTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENENGKIFHGKPIYAGRA 263 HSP 2 Score: 124.02 bits (310), Expect = 5.918e-28 Identity = 63/172 (36.63%), Postives = 102/172 (59.30%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV---AIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG-KSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 N+F KNL + + L + +G I + I D G+SKGFGF FE+ E+A+N ++ NG + + K ++ G +K ERE +TK+ N+++KN+D+S ++ L+++F ++GTITSA+VM+D SK FGFV + D+A +AV +NG+ + YV A Sbjct: 189 NVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENENGKIFHGKPIYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYVALA 360
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.952e-55 Identity = 108/196 (55.10%), Postives = 141/196 (71.94%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 +NF L + IRIM+S RDP +RKSG GNIFIKNL+ SID+KAL+DTFS FGNILSCK+A D G S+GFGFV FE E+AQ AI+ +NGML+ND++VFVGHF ++ERE A +F N++VKNL ++ L+ +F ++G + S VMRD G S+CFGFVNFE ++A KAV +NGK+ R Y G+A Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRA 266 HSP 2 Score: 130.568 bits (327), Expect = 6.323e-30 Identity = 73/179 (40.78%), Postives = 104/179 (58.10%), Query Frame = -2 Query: 33 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 530 NI++KNL +D + L D FS FG +LS K+ D SG S+ FGFV FE E AQ A+ +NG ++ + ++ G ++ ER+ +K +F N++VKNLD+S D+ L+K F YG ITSA VM +G G SK FGFV F + ++A KAV +NG+ + YV A Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQN-ELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALA 368 HSP 3 Score: 87.8113 bits (216), Expect = 4.700e-17 Identity = 51/173 (29.48%), Postives = 96/173 (55.49%), Query Frame = -2 Query: 39 SGTG----NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVG 542 SG+G ++++ +L + L++ FSP G ILS ++ D + +S G+ ++ F+ A+ A+D +N ++ + + + +R+ K+ N+F+KNL++S ++ L F +G I S V D G S+ FGFV+FE + A +A++ +NG +DR+ +VG Sbjct: 4 SGSGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRI----MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVG 171 HSP 4 Score: 79.337 bits (194), Expect = 1.672e-14 Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = -2 Query: 279 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 530 N+++KNLD SID L FSP+G I S K+ T+G G SKGFGFV F + E A A+ ++NG ++ K ++V RK+ER+ + Sbjct: 295 NLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
BLAST of CB304894 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.549e-55 Identity = 104/196 (53.06%), Postives = 148/196 (75.51%), Query Frame = -2 Query: 33 LNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 614 LN+TP+ + RIM+S RDPS R+SG GNIFIKNL +ID+KALHDTFS FG ILS K+ATD GQSK FGFV +E +E+AQ AI+ +NGML+ND++V+VG + K++RE+ +K + N++VKN+D + T+++ +++F +G ITS + +D +GKSK FGFVNFE + AAKAV+ LN K+ + ++ YVG+A Sbjct: 128 LNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRA 323 HSP 2 Score: 132.494 bits (332), Expect = 1.664e-30 Identity = 73/184 (39.67%), Postives = 107/184 (58.15%), Query Frame = -2 Query: 33 KSGTGNIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKA 545 K+ NI++KN+D + K + F+PFG I S + D G+SKGFGFV FE E+A A+++LN IN ++++VG +K+ER T +K ++ N+FVKNLDE E L++ F +GTITS+ VM D GKSK FGFV F ++A KA+ +N + + + YV A Sbjct: 244 KANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRER-TEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALA 426 HSP 3 Score: 78.9518 bits (193), Expect = 2.183e-14 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = -2 Query: 282 NIFIKNLDKSIDHKALHDTFSPFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 530 N+F+KNLD+ ID + L + F PFG I S K+ D +G+SKGFGFV F E A AI ++N ++N K ++V RK R + Sbjct: 352 NLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDVRRS 434 The following BLAST results are available for this feature:
BLAST of CB304894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304894 ID=CB304894; Name=CB304894; organism=Citrus sinensis; type=EST; length=618bpback to top |