CB305012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.005e-23 Identity = 40/76 (52.63%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 ++ + SE+V ++D ++GKE EK P+F+K G++ +VK P KP+ VE FSD+PPLGRFA+RDM +TV VGVI +V+ Sbjct: 353 SIACRVSEIVARLDPKTGKEAEKNPQFIKQGESAIVKFKPIKPLCVEKFSDFPPLGRFAMRDMGKTVGVGVINDVK 428 HSP 2 Score: 38.5058 bits (88), Expect = 1.005e-23 Identity = 17/41 (41.46%), Postives = 26/41 (63.41%), Query Frame = -3 Query: 440 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 562 +P A FT++VI++ HP + GY PV+ HT+ IA +V Sbjct: 318 NPPTVAEEFTARVIVVWHPTALAVGYTPVVHVHTASIACRV 358
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.880e-23 Identity = 41/74 (55.41%), Postives = 59/74 (79.73%), Query Frame = -1 Query: 223 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 444 + +EL +KID ++GKE+EK P+FLK+GD+ +VKM P K +VVE F ++P LGRFA+RDM +TV VGV+ +V+ K Sbjct: 357 RITELTSKIDPKTGKEVEKNPQFLKSGDSAIVKMKPIKELVVEKFREFPALGRFAMRDMGKTVGVGVVIDVKPK 430 HSP 2 Score: 38.891 bits (89), Expect = 2.880e-23 Identity = 16/46 (34.78%), Postives = 28/46 (60.87%), Query Frame = -3 Query: 440 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 577 + S + P A FT+Q+I++ HP + GY PV+ HT+ +A ++ Sbjct: 313 AGSLNVPPTVADEFTAQIIVIWHPTAVSVGYTPVVHIHTASVACRI 358
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.875e-23 Identity = 40/76 (52.63%), Postives = 60/76 (78.95%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 T+P + +ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 362 TVPVQITELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437 HSP 2 Score: 36.5798 bits (83), Expect = 4.875e-23 Identity = 14/42 (33.33%), Postives = 26/42 (61.90%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D+ A ++++++ HP IG GYAPV+ HT+ + V++ Sbjct: 326 DNVPTVAEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQI 367
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 8.260e-23 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = -1 Query: 220 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 444 KF EL+ KID +G+ +E+ P FLK G+A V++ PTKPMV+E S P LGRFA+RDM QTVA G+ +EK++ Sbjct: 349 KFEELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGMCVKIEKEE 423 HSP 2 Score: 41.2022 bits (95), Expect = 8.260e-23 Identity = 17/44 (38.64%), Postives = 25/44 (56.82%), Query Frame = -3 Query: 443 DDPAREAA---NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 565 D+PA F +Q++++ HP I GY PV CHT+ +A K Sbjct: 306 DEPATVVTPDDTFIAQIVVLQHPSAITAGYTPVFHCHTAQVACK 349
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.074e-22 Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = -1 Query: 223 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 456 ++ + SE+ ++ID ++GKE EK P+F+K GD+ +VK P K +V E F ++P LGRFA+RDM +TV VGVI +V+ + Sbjct: 353 SIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDVKPR 430 HSP 2 Score: 44.669 bits (104), Expect = 1.074e-22 Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = -3 Query: 440 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 577 + S +P A FT+QVI++ HP +G GY PVL HT+ IA +V Sbjct: 313 AGSVQNPPTVADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRV 358
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.397e-22 Identity = 40/76 (52.63%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 T+P + ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 362 TVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437 HSP 2 Score: 36.1946 bits (82), Expect = 1.397e-22 Identity = 13/36 (36.11%), Postives = 24/36 (66.67%), Query Frame = -3 Query: 440 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 547 A ++++++ HP IG GYAPV+ HT+ + V++ Sbjct: 332 AEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQI 367
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.398e-22 Identity = 37/76 (48.68%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 ++ S+ E+ K+D R+GK +E+ P+F+K GDA +V+ P KP+VVE +SD+PPLGRFA+RDM +T+ +GV+ +V+ Sbjct: 354 SVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429 HSP 2 Score: 38.891 bits (89), Expect = 1.398e-22 Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D+P A FT++V I+ HP I GY PV+ HT+ +A ++ Sbjct: 318 DNPPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRI 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.818e-22 Identity = 39/76 (51.32%), Postives = 60/76 (78.95%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 T+P + +EL++K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 362 TVPVQITELISKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437 HSP 2 Score: 35.039 bits (79), Expect = 1.818e-22 Identity = 12/31 (38.71%), Postives = 23/31 (74.19%), Query Frame = -3 Query: 440 SQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 532 ++++++ HP IG GYAPV+ HT+ + V++ Sbjct: 337 ARIVVLWHPTAIGPGYAPVMHIHTATVPVQI 367
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.366e-22 Identity = 35/76 (46.05%), Postives = 59/76 (77.63%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 ++ ++ +E+ K+D R+G+ +EK P+FLK GDA +VK P KPMV+E +S++P LGRFA+RDM +T+ +G++ +V+ Sbjct: 355 SIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430 HSP 2 Score: 39.6614 bits (91), Expect = 2.366e-22 Identity = 16/42 (38.10%), Postives = 25/42 (59.52%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D P A FT+++ ++ HP I GY PV+ HT+ IA ++ Sbjct: 319 DKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARI 360
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.367e-22 Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F EL+ K+D R+G+ +E+ P+FLK GDA +VK+ PTKPMV+E + P LGRFA+RDM T+A G+ +V+ K+ Sbjct: 354 FIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMAIDVKAKN 427 HSP 2 Score: 41.5874 bits (96), Expect = 2.367e-22 Identity = 16/39 (41.03%), Postives = 24/39 (61.54%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 D+P A FT+Q++++ HP I GY PV HT+ +A Sbjct: 313 DNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVA 351 The following BLAST results are available for this feature:
BLAST of CB305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305012 ID=CB305012; Name=CB305012; organism=Citrus sinensis; type=EST; length=579bpback to top |