CB305012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.639e-58 Identity = 74/76 (97.37%), Postives = 76/76 (100.00%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+ELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKNVEKKDP Sbjct: 359 KFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 434 HSP 2 Score: 93.9745 bits (232), Expect = 2.639e-58 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+EAA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.296e-57 Identity = 70/76 (92.11%), Postives = 76/76 (100.00%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+EL+TKIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIK+VEKKDP Sbjct: 359 KFAELITKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 434 HSP 2 Score: 95.9005 bits (237), Expect = 1.296e-57 Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PEA (Elongation factor 1-alpha OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.872e-57 Identity = 70/76 (92.11%), Postives = 76/76 (100.00%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+EL+TKIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIK+VEKKDP Sbjct: 359 KFAELITKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 434 HSP 2 Score: 94.7449 bits (234), Expect = 2.872e-57 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA++AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKDAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.745e-57 Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+EL+TKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKNVEKKDP Sbjct: 359 KFAELMTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 434 HSP 2 Score: 93.2041 bits (230), Expect = 3.745e-57 Identity = 42/45 (93.33%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+EAANFT+QVII+NHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKEAANFTAQVIIINHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.082e-56 Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+E++TKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIK+VEKKDP Sbjct: 359 KFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 434 HSP 2 Score: 95.9005 bits (237), Expect = 1.082e-56 Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+EAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.082e-56 Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+ELVTKIDRRSGKELEKEPKFLKNGDAGMVKM+PTKPMVVETFS YPPLGRFAVRDMRQTVAVGVIK+VEKKDP Sbjct: 359 KFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 434 HSP 2 Score: 91.6633 bits (226), Expect = 1.082e-56 Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 S SKDDPA+EAA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SGSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.397e-56 Identity = 70/76 (92.11%), Postives = 76/76 (100.00%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+E++TKIDRRSGKE+EKEPKFLKNGDAGMVKMIPTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKNV+KKDP Sbjct: 359 KFAEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVDKKDP 434 HSP 2 Score: 91.2781 bits (225), Expect = 2.397e-56 Identity = 42/45 (93.33%), Postives = 44/45 (97.78%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+ AA+FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.074e-56 Identity = 69/76 (90.79%), Postives = 75/76 (98.68%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KFSE++TKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIK+V+KKDP Sbjct: 359 KFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDP 434 HSP 2 Score: 93.2041 bits (230), Expect = 4.074e-56 Identity = 43/45 (95.56%), Postives = 44/45 (97.78%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+ AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.027e-56 Identity = 69/76 (90.79%), Postives = 76/76 (100.00%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+E++TKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGV+KNV+KKDP Sbjct: 359 KFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVVKNVDKKDP 434 HSP 2 Score: 90.1225 bits (222), Expect = 9.027e-56 Identity = 41/45 (91.11%), Postives = 44/45 (97.78%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+ AA+FT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.177e-55 Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = -1 Query: 217 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKDP 444 KF+E+ TKIDRRSGKELEKEPKFLKNGDAG VKMIPTKPMVVETF YPPLGRFAVRDMRQTVAVGVIK+VEKKDP Sbjct: 359 KFAEIQTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFMSYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 434 HSP 2 Score: 94.7449 bits (234), Expect = 1.177e-55 Identity = 43/45 (95.56%), Postives = 45/45 (100.00%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 SNSKDDPA+EAANFT+QVIIMNHPGQIGNGYAPVLDCHTSHIAVK Sbjct: 315 SNSKDDPAKEAANFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 359 The following BLAST results are available for this feature:
BLAST of CB305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305012 ID=CB305012; Name=CB305012; organism=Citrus sinensis; type=EST; length=579bpback to top |