CB305012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 4.005e-22 Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = -1 Query: 229 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 444 + +E++ KID R+GKE+EK P FLK GD +VK P KP+VVE +SD+ LGRFA+RDM +T+ +G + ++ Sbjct: 359 RITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430 HSP 2 Score: 40.4318 bits (93), Expect = 4.005e-22 Identity = 17/46 (36.96%), Postives = 28/46 (60.87%), Query Frame = -3 Query: 440 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 577 + S D P A FT+++++M HP I GY PV+ HT+ +A ++ Sbjct: 315 AGSLDVPPTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRI 360
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.005e-22 Identity = 37/79 (46.84%), Postives = 60/79 (75.95%), Query Frame = -1 Query: 220 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 456 T+P F EL+ K+D R+G E++P+++K GD+ +V+ P KP+VVE +S++PPLGRFA+RD +T+A GV+ +V+K + Sbjct: 353 TVPVTFEELLQKLDPRTGSVAEEKPQYIKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIAAGVVIDVKKAE 431 HSP 2 Score: 36.5798 bits (83), Expect = 4.005e-22 Identity = 15/39 (38.46%), Postives = 22/39 (56.41%), Query Frame = -3 Query: 446 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 562 +P A FT ++ ++ HP I GY PVL HT+ + V Sbjct: 318 NPPTVAEEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPV 356
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.006e-22 Identity = 35/73 (47.95%), Postives = 55/73 (75.34%), Query Frame = -1 Query: 226 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 444 +F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P LGRFA+RDM QTVA G++ +++K Sbjct: 354 RFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426 HSP 2 Score: 41.2022 bits (95), Expect = 4.006e-22 Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = -3 Query: 443 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 553 R F +Q+I++NHP I GY PVL HT+ +AV+ Sbjct: 318 RPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVR 354
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.212e-22 Identity = 34/75 (45.33%), Postives = 56/75 (74.67%), Query Frame = -1 Query: 220 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 444 +F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ +++K + Sbjct: 354 RFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428 HSP 2 Score: 41.2022 bits (95), Expect = 5.212e-22 Identity = 18/45 (40.00%), Postives = 26/45 (57.78%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 +N+ R F +Q+I++NHP I GY PVL HT +AV+ Sbjct: 310 TNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVR 354
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 6.780e-22 Identity = 34/75 (45.33%), Postives = 56/75 (74.67%), Query Frame = -1 Query: 220 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 444 +F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ +++K + Sbjct: 354 RFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428 HSP 2 Score: 41.2022 bits (95), Expect = 6.780e-22 Identity = 18/45 (40.00%), Postives = 26/45 (57.78%), Query Frame = -3 Query: 443 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 577 +N+ R F +Q+I++NHP I GY PVL HT +AV+ Sbjct: 310 TNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVR 354
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.781e-22 Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = -1 Query: 223 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 441 F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G++ +V+ K Sbjct: 350 FTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422 HSP 2 Score: 43.8986 bits (102), Expect = 6.781e-22 Identity = 17/39 (43.59%), Postives = 24/39 (61.54%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 ++P A FT+QV+++ HP + GY PV CHTS A Sbjct: 309 ENPPTVAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTA 347
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.782e-22 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = -1 Query: 232 SELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 438 +E+ K+D R+G E+ P F+K GDA ++ + PTKPMV+E + P LGRFA+RDM T+A G+ +NV Sbjct: 353 TEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421 HSP 2 Score: 47.3654 bits (111), Expect = 6.782e-22 Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D+P A FT+Q++++ HP I GY PV CHT+ +A + Sbjct: 311 DNPPTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTI 352
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.784e-22 Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = -1 Query: 244 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 441 F ELV K++ +G+ E+ P FLK G+A +VK+ PTKP+V+E D P +GRFA+RDM QTVA G+ Sbjct: 340 FLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405 HSP 2 Score: 48.9062 bits (115), Expect = 6.784e-22 Identity = 18/39 (46.15%), Postives = 27/39 (69.23%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 D+P + A FT+Q++++ HPG I GY PV CHT+ +A Sbjct: 299 DNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVA 337
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 8.823e-22 Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = -1 Query: 241 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 444 +F EL KID R+G+ E+ P+FLK GDA +VK+ PT+PMV+E D PP+GRFA+RDM T+ G++ Sbjct: 349 RFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMGRFAIRDMGMTIGAGMV 416 HSP 2 Score: 40.817 bits (94), Expect = 8.823e-22 Identity = 16/41 (39.02%), Postives = 26/41 (63.41%), Query Frame = -3 Query: 443 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 565 D+P +FT+Q++++ HP I GY PV+ HT+ IA + Sbjct: 309 DNPPTVVKDFTAQLVVLQHPTAITVGYTPVVHAHTAQIACR 349
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.148e-21 Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = -1 Query: 223 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 441 F EL+ K+D R+G+ E+ P FLK GDA +VK+ PT+PMV+E + P LGRFAVRDM T+A GV ++ K Sbjct: 350 FVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITPK 422 HSP 2 Score: 42.3578 bits (98), Expect = 1.148e-21 Identity = 17/39 (43.59%), Postives = 24/39 (61.54%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 D P A F +QV++++HP + GY PV CHT+ IA Sbjct: 309 DVPPTVAEEFIAQVVVLHHPSALTVGYTPVFHCHTAQIA 347 The following BLAST results are available for this feature:
BLAST of CB305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305012 ID=CB305012; Name=CB305012; organism=Citrus sinensis; type=EST; length=579bpback to top |