CB305012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.148e-21 Identity = 36/74 (48.65%), Postives = 53/74 (71.62%), Query Frame = -1 Query: 223 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 444 + E+V ++ + G L+++P F+KNGD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G ++EK+ Sbjct: 351 RIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424 HSP 2 Score: 43.5134 bits (101), Expect = 1.148e-21 Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D P FT+Q+I++NHP I GY PV HT+ +A ++ Sbjct: 311 DTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRI 352
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.941e-21 Identity = 38/76 (50.00%), Postives = 58/76 (76.32%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 T+P + ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FS++P LGRFA+RDM +T+A G I V+ Sbjct: 362 TVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSEFPALGRFALRDMGRTIAAGQIIEVK 437 HSP 2 Score: 37.3502 bits (85), Expect = 1.941e-21 Identity = 16/42 (38.10%), Postives = 26/42 (61.90%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D+ A ++V+I+ HP IG GYAPV+ HT+ + V++ Sbjct: 326 DNVPTVAEEIVARVVILWHPTAIGPGYAPVMHIHTATVPVQI 367
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.942e-21 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 41.2022 bits (95), Expect = 1.942e-21 Identity = 15/38 (39.47%), Postives = 25/38 (65.79%), Query Frame = -3 Query: 449 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 562 +P A +FT+Q++++ HP + +GY PV HT+ IA Sbjct: 314 NPPTVATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.526e-21 Identity = 34/75 (45.33%), Postives = 55/75 (73.33%), Query Frame = -1 Query: 220 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 444 +F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G++ +++K D Sbjct: 354 RFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAD 428 HSP 2 Score: 41.2022 bits (95), Expect = 2.526e-21 Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = -3 Query: 443 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 553 R F +Q+I++NHP I GY PVL HT+ +AV+ Sbjct: 318 RPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVR 354
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.527e-21 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = -1 Query: 223 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 441 F EL K+D RSG+ E+ P FLK GDA +V++ PTKPMV+E + P LGRFAVRDM T+A G+ ++ K Sbjct: 350 FIELKKKLDPRSGQTKEENPTFLKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQPK 422 HSP 2 Score: 42.3578 bits (98), Expect = 2.527e-21 Identity = 17/39 (43.59%), Postives = 23/39 (58.97%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 + P A FT+QV+++ HP I GY PV CHT+ A Sbjct: 309 EQPPTVADEFTAQVVVLQHPSAITVGYTPVFHCHTTQTA 347
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.527e-21 Identity = 36/74 (48.65%), Postives = 51/74 (68.92%), Query Frame = -1 Query: 223 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 444 K E+V ++ + G L+ +P F+K GD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G ++EK+ Sbjct: 351 KIDEIVRTLNPKDGTTLKDKPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424 HSP 2 Score: 44.669 bits (104), Expect = 2.527e-21 Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D P FT+Q++++NHP I GY PV HT+ +A K+ Sbjct: 311 DSPPTVVRAFTAQIVVLNHPSVIAPGYKPVFHVHTAQVACKI 352
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.285e-21 Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 ++ S+ E+ KID R+GK +E+ P FLK GDA +V P KPMV+E F ++ PLGRFA+RDM +TV +G++ +V+ Sbjct: 357 SVASRIIEIKQKIDPRTGKVIEENPSFLKPGDAAVVVFKPLKPMVIEKFQEFQPLGRFAMRDMGKTVGIGIVTDVK 432 HSP 2 Score: 38.5058 bits (88), Expect = 3.285e-21 Identity = 15/42 (35.71%), Postives = 26/42 (61.90%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 ++P A FT++V ++ HP I GY PV+ HT+ +A ++ Sbjct: 321 ENPPTVADQFTARVFVIWHPSAIAVGYTPVIHAHTASVASRI 362
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.276e-21 Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = -1 Query: 223 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 441 F EL K+D RSG+ E+ P FLK+GDA +V++ P++PMV+E+ + P LGRFA+RDM T+A G+ V+ K Sbjct: 350 FVELRKKLDPRSGQTKEENPTFLKSGDAAIVQIKPSRPMVIESVKEIPQLGRFAIRDMGTTIAAGMCIAVQPK 422 HSP 2 Score: 44.2838 bits (103), Expect = 4.276e-21 Identity = 18/39 (46.15%), Postives = 24/39 (61.54%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 D P A FT+Q++++ HP I GY PV CHT+ IA Sbjct: 309 DIPPTVADEFTAQIVVLQHPSAITVGYTPVFHCHTAQIA 347
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.561e-21 Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 39.6614 bits (91), Expect = 5.561e-21 Identity = 15/38 (39.47%), Postives = 24/38 (63.16%), Query Frame = -3 Query: 449 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 562 +P A +FT+Q++++ HP + GY PV HT+ IA Sbjct: 314 NPPTVATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.565e-21 Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = -1 Query: 232 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 441 F EL K+D +G+ E+ P FLK G+A VK+ PTKPMV+E P +GRFA+RDM QTVA G+ +V Sbjct: 340 FLELTAKLDPATGQVAEENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGLCIDV 409 HSP 2 Score: 45.4394 bits (106), Expect = 5.565e-21 Identity = 18/39 (46.15%), Postives = 24/39 (61.54%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 DD A F +Q++++ HPG I GY PV CHTS +A Sbjct: 299 DDAPAVAKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVA 337 The following BLAST results are available for this feature:
BLAST of CB305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305012 ID=CB305012; Name=CB305012; organism=Citrus sinensis; type=EST; length=579bpback to top |