CB305012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.234e-21 Identity = 33/75 (44.00%), Postives = 55/75 (73.33%), Query Frame = -1 Query: 220 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 444 +F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G++ +++K + Sbjct: 354 RFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428 HSP 2 Score: 41.2022 bits (95), Expect = 7.234e-21 Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = -3 Query: 443 REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 553 R F +Q+I++NHP I GY PVL HT+ +AV+ Sbjct: 318 RPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVR 354
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 9.410e-21 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 41.2022 bits (95), Expect = 9.410e-21 Identity = 16/38 (42.11%), Postives = 25/38 (65.79%), Query Frame = -3 Query: 449 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 562 +P AA+FT+Q++++ HP + GY PV HT+ IA Sbjct: 314 NPPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.224e-20 Identity = 32/72 (44.44%), Postives = 52/72 (72.22%), Query Frame = -1 Query: 223 SELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 438 SE V+KI+ +G E+ PKFLK GD+ ++K+ P +P +ETF ++P +GRFA+RDM T+A G++K + ++ Sbjct: 362 SEFVSKINPATGAVEEENPKFLKVGDSAIIKIRPVRPTPIETFKEFPEMGRFALRDMGATIAAGIVKEITEE 433 HSP 2 Score: 43.1282 bits (100), Expect = 1.224e-20 Identity = 15/38 (39.47%), Postives = 26/38 (68.42%), Query Frame = -3 Query: 449 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 562 +P + A F +Q+I+++HP + GY PV+ CHT+ +A Sbjct: 321 NPPKVAKEFLAQIIVIHHPTALAPGYTPVMHCHTAQVA 358
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.224e-20 Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = -1 Query: 223 ELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 435 EL K+D +SG+ E+ P FLK GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ +V++K Sbjct: 352 ELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422 HSP 2 Score: 43.1282 bits (100), Expect = 1.224e-20 Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D+P + A F Q++++ HP I GY PV HTS IA ++ Sbjct: 309 DNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQL 350
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.592e-20 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 41.2022 bits (95), Expect = 1.592e-20 Identity = 16/38 (42.11%), Postives = 25/38 (65.79%), Query Frame = -3 Query: 449 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 562 +P AA+FT+Q++++ HP + GY PV HT+ IA Sbjct: 314 NPPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.592e-20 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 41.2022 bits (95), Expect = 1.592e-20 Identity = 16/38 (42.11%), Postives = 25/38 (65.79%), Query Frame = -3 Query: 449 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 562 +P AA+FT+Q++++ HP + GY PV HT+ IA Sbjct: 314 NPPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.592e-20 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 354 FMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 41.2022 bits (95), Expect = 1.592e-20 Identity = 16/38 (42.11%), Postives = 25/38 (65.79%), Query Frame = -3 Query: 449 DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 562 +P AA+FT+Q++++ HP + GY PV HT+ IA Sbjct: 314 NPPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.502e-20 Identity = 36/76 (47.37%), Postives = 58/76 (76.32%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 T+P++ EL++++D +G+ +E++P+F+K GD MV++ P KP+VVE FSD P LGRF++RDM +TVA G I ++ Sbjct: 361 TVPTQIIELISRLDPATGQTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPALGRFSLRDMGRTVAAGQIIEIK 436 HSP 2 Score: 34.6538 bits (78), Expect = 3.502e-20 Identity = 12/42 (28.57%), Postives = 24/42 (57.14%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 ++P A +++ ++ HP IG GY PV+ HT+ + ++ Sbjct: 325 NNPPTVAEEIVARIAVLEHPTTIGVGYTPVMHVHTATVPTQI 366
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.002e-19 Identity = 35/76 (46.05%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 229 TLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 456 ++ S+ E+ K+D ++G+ +E+ P+FLK GDA +V+ P KP+VVE FS+ P LGRFA+RDM +TV +G++ +V+ Sbjct: 353 SVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVK 428 HSP 2 Score: 34.6538 bits (78), Expect = 1.002e-19 Identity = 13/42 (30.95%), Postives = 24/42 (57.14%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D P A F +++ ++ HP I GY PV+ HT+ ++ ++ Sbjct: 317 DKPPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRI 358
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.003e-19 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = -1 Query: 223 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 423 K+D ++G+ E+ P FLK GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ +V++K Sbjct: 356 KLDPKTGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422 HSP 2 Score: 43.1282 bits (100), Expect = 1.003e-19 Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D+P + A F Q++++ HP I GY PV HTS IA ++ Sbjct: 309 DNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQL 350 The following BLAST results are available for this feature:
BLAST of CB305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305012 ID=CB305012; Name=CB305012; organism=Citrus sinensis; type=EST; length=579bpback to top |