CB305012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.696e-19 Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = -1 Query: 223 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 423 K+D ++G+ E+ P F+K GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ +V++K Sbjct: 356 KLDPKTGQVKEEHPTFIKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422 HSP 2 Score: 43.1282 bits (100), Expect = 1.696e-19 Identity = 17/42 (40.48%), Postives = 25/42 (59.52%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 D+P + A F Q++++ HP I GY PV HTS IA ++ Sbjct: 309 DNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQL 350
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.868e-19 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = -1 Query: 220 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 441 F EL K++ +G+ E+ P FLK GDA +VK++PTKPMV+E + P LGRFA+RDM TVA G+ +V+ K+ Sbjct: 354 FMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMCIDVKAKN 427 HSP 2 Score: 36.965 bits (84), Expect = 2.868e-19 Identity = 13/33 (39.39%), Postives = 21/33 (63.64%), Query Frame = -3 Query: 449 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 547 A FT+Q++++ HP + GY PV HT+ +A Sbjct: 319 AEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.729e-19 Identity = 34/77 (44.16%), Postives = 54/77 (70.13%), Query Frame = -1 Query: 223 LPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 453 +P +F EL K++ +G+ +E+ P+ L+ G+A +VK+ P KP+V+E F P LGRFA+RDM +TVA+G+ + V K Sbjct: 351 VPVRFEELRGKVNPATGQVIEENPQALRPGEAAVVKLKPLKPVVIEPFDKIPQLGRFAIRDMGRTVAIGIARQVTPK 427 HSP 2 Score: 38.1206 bits (87), Expect = 3.729e-19 Identity = 16/41 (39.02%), Postives = 24/41 (58.54%), Query Frame = -3 Query: 443 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 565 D+P A + + ++ HP I GYAPVL HT+H+ V+ Sbjct: 314 DNPPTVAEEIVALIHVIYHPSAITVGYAPVLHVHTAHVPVR 354
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.852e-19 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = -1 Query: 226 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 444 + E+V I+ + G L+++P F+K GD +VK++P + +V+E S++P LGRFA+RDM TVA G ++EK Sbjct: 351 RIDEIVKTINPKDGTTLKEKPDFIKTGDIAIVKVVPDRALVIEKVSEFPQLGRFAIRDMGMTVAAGQCIDLEK 423 HSP 2 Score: 42.743 bits (99), Expect = 4.852e-19 Identity = 15/42 (35.71%), Postives = 26/42 (61.90%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 ++P FT+Q++++NHP I GY PV HT+ +A ++ Sbjct: 311 NNPPTVVKGFTAQIVVLNHPSVIAAGYKPVFHVHTAQVACRI 352
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.204e-19 Identity = 31/72 (43.06%), Postives = 50/72 (69.44%), Query Frame = -1 Query: 223 SELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 438 ++++ +D ++G E+ P F+K GDA +V + PT+P+V+E + P LGRFA+RDM QTVA GV+ ++ K Sbjct: 355 TQILATLDPKTGGVKEQNPPFIKTGDAAIVLIRPTRPLVIEKVKEIPQLGRFAIRDMGQTVAAGVVMDITPK 426 HSP 2 Score: 40.817 bits (94), Expect = 8.204e-19 Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = -3 Query: 449 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 547 A F +QV+++ HP I GY PV CHT+ +A Sbjct: 319 AVEFKAQVVVLQHPSAITAGYTPVFHCHTAQVA 351
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.067e-18 Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = -1 Query: 223 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 423 K+D +SG+ E+ P ++K GDA +V + PT+PM +E S+ P LGRFA+RDM T+A G+ +V +K Sbjct: 355 KLDPKSGQVKEENPTYIKAGDAAIVTIKPTRPMCIEPVSEIPQLGRFAIRDMGMTIAAGMCMSVTQK 421 HSP 2 Score: 42.743 bits (99), Expect = 1.067e-18 Identity = 17/39 (43.59%), Postives = 22/39 (56.41%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 D P A FT Q++++ HP I GY PV CHT+ A Sbjct: 308 DKPPSVADEFTGQIVVLQHPSAITVGYTPVFHCHTAQTA 346
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.067e-18 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = -1 Query: 223 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 423 KID SG+ E+ P F++NGDA +V + P KP+ +E S+ P LG FA+RDM QT+A G + V ++ Sbjct: 355 KIDPSSGEVAEENPDFIQNGDAAVVTVRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLGVNER 421 HSP 2 Score: 44.669 bits (104), Expect = 1.067e-18 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 DDP A F +Q+++M HP I GY PV HT+ +A V Sbjct: 308 DDPPSVAETFQAQIVVMQHPSVITEGYTPVFHAHTAQVACTV 349
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.388e-18 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = -1 Query: 244 FSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 441 F L K+D +G+ E+ P FLK GDA +V + PTKPMV+E + P +GRFA+RDM QTVA G+ Sbjct: 340 FLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVAAGM 405 HSP 2 Score: 38.891 bits (89), Expect = 1.388e-18 Identity = 14/43 (32.56%), Postives = 25/43 (58.14%), Query Frame = -3 Query: 449 SNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 577 + + +P A F +Q++++ HPG + GY PV HT+ +A Sbjct: 295 AGTTQNPPSVAKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVA 337
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.157e-18 Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = -1 Query: 223 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 423 KID SG+ E+ P F+++GDA +V + P KP+ +E+ ++ P LG FA+RDM QTVA G + +V ++ Sbjct: 356 KIDPSSGEVAEENPDFIQSGDAAVVTVRPQKPLSIESSNEIPELGSFAIRDMGQTVAAGKVLSVNER 422 HSP 2 Score: 43.8986 bits (102), Expect = 5.157e-18 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 DDP A F +QV++M HP I GY PV HT+ +A + Sbjct: 309 DDPPSVAETFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTI 350
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 8.728e-18 Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = -3 Query: 449 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIA 565 +DP +FT+QVI+MNHP +I GY PV+DCHT+HIA Sbjct: 300 NDPPVGCKSFTAQVIVMNHPKKIQPGYTPVIDCHTAHIA 338 HSP 2 Score: 53.9138 bits (128), Expect = 8.728e-18 Identity = 26/57 (45.61%), Postives = 36/57 (63.16%), Query Frame = -1 Query: 274 KFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 444 +F + K+D+R+ K + P GD +VKM+P KP+ ETF+DY PLG FAVR Sbjct: 340 QFQLFLQKLDKRTLKPEMENPPDAGRGDCIIVKMVPQKPLCCETFNDYAPLGPFAVR 396 The following BLAST results are available for this feature:
BLAST of CB305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305012 ID=CB305012; Name=CB305012; organism=Citrus sinensis; type=EST; length=579bpback to top |