CB305012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.468e-17 Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = -1 Query: 220 KFSELVTKIDRRSGKEL-------------EKEPK------FLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 444 KF+ +++K D+R GK+ + EP+ K G++ V + PTK MVVE +S Y PLGRFAVRDM++TVAVGVI+ V+ ++ Sbjct: 386 KFASILSKKDKR-GKQTHDVSDDTEWATKDDAEPRNNRMNIAAKTGESVNVWLQPTKAMVVEAYSMYSPLGRFAVRDMKKTVAVGVIQCVQPRN 478 HSP 2 Score: 47.3654 bits (111), Expect = 1.468e-17 Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = -3 Query: 443 NSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVK 574 ++K+DP F + VII +H I NGY PVLDCHT+HIA K Sbjct: 344 DTKNDPPIPTECFLANVIIQDHKN-IRNGYTPVLDCHTAHIACK 386
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.916e-17 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 226 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 423 K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + +V++ Sbjct: 355 KMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420 HSP 2 Score: 43.5134 bits (101), Expect = 1.916e-17 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 DDP A F +QV++M HP I GY PV HT+ +A + Sbjct: 308 DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTI 349
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.916e-17 Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 226 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 423 K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + +V++ Sbjct: 355 KMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420 HSP 2 Score: 43.5134 bits (101), Expect = 1.916e-17 Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = -3 Query: 440 DDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 565 DDP A F +QV++M HP I GY PV HT+ +A + Sbjct: 308 DDPPSVADTFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTI 349
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.202e-16 Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = -1 Query: 223 KIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 423 K+D SG+ E++P F+K+GDA +V + P KP+ +E ++ P LG FAVRDM QT+A G + V+++ Sbjct: 355 KLDPASGEVAEEDPDFIKSGDAAVVTVRPQKPLSIEPSNEIPELGSFAVRDMGQTIAAGKVLEVDER 421 HSP 2 Score: 38.1206 bits (87), Expect = 1.202e-16 Identity = 15/36 (41.67%), Postives = 21/36 (58.33%), Query Frame = -3 Query: 440 AANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKV 547 A F +QV++M HP I GY PV HT+ +A + Sbjct: 314 AETFKAQVVVMQHPSVITAGYTPVFHAHTAQVACTI 349
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.297e-14 Identity = 33/83 (39.76%), Postives = 57/83 (68.67%), Query Frame = -1 Query: 226 LTATPPTLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 474 L A +P +F +++ K+D R+G +E+ P+F+K GD+ +V + P KP+V+E + P LGRFA+RDM T+A G++ +++K Sbjct: 344 LHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK 426
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.297e-14 Identity = 35/83 (42.17%), Postives = 56/83 (67.47%), Query Frame = -1 Query: 226 LTATPPTLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 474 L A +P +F +L+ KID R+G E+ P+F+K GD+ +V + P KP+V+E + P LGRFA+RDM T+A G++ +++K Sbjct: 344 LHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 33/83 (39.76%), Postives = 57/83 (68.67%), Query Frame = -1 Query: 226 LTATPPTLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 474 L A +P +F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ ++++ Sbjct: 346 LHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 428
BLAST of CB305012 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.593e-14 Identity = 33/83 (39.76%), Postives = 57/83 (68.67%), Query Frame = -1 Query: 226 LTATPPTLPSKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 474 L A +P +F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ ++++ Sbjct: 344 LHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 426 The following BLAST results are available for this feature:
BLAST of CB305012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305012 ID=CB305012; Name=CB305012; organism=Citrus sinensis; type=EST; length=579bpback to top |