CB305083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA1_MAIZE (60S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 41/56 (73.21%), Postives = 50/56 (89.29%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC YA LIL DDGIAIT +KIA +VKAAN+ +ESYWP+LFAKLLEKRN++DLI++ Sbjct: 6 LACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILS 61
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA11_ARATH (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana GN=RPP1A PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 1.716e-17 Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC+YA +IL D+GIAIT DKIA LVKAA VSIESYWP LFAK+ EKRN+ DLIMN Sbjct: 7 LACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA13_ARATH (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana GN=RPP1C PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.822e-17 Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC+YA +IL D+GIAIT DKIA LVKAA V+IESYWP LFAK+ EKRN+ DLIMN Sbjct: 7 LACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA12_ARATH (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana GN=RPP1B PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.822e-17 Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC+YA +IL D+GIAIT+DKIA LVKAA V IESYWP LFAK+ EKRN+ DLIMN Sbjct: 7 LACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMN 62
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA1_CHLRE (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.102e-15 Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LACTYA LILHDDG+ IT D I + KAA V +E YWP+LFAKL K+++DDLI N Sbjct: 6 LACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLITN 61
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA1_DROME (60S acidic ribosomal protein P1 OS=Drosophila melanogaster GN=RpLP1 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.702e-12 Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC YA LIL DD +A+T +KI ++KAANV +E YWP LFAK LE N+ DLI N Sbjct: 7 LACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITN 62
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12 Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC Y+ LILHDD + +T DKI L+KAA VS+E +WP LFAK L N+ LI N Sbjct: 7 LACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.837e-11 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI N Sbjct: 7 LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.837e-11 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = -3 Query: 390 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLIMN 557 LAC Y+ LILHDD + +T DKI L+KAA V++E +WP LFAK L N+ LI N Sbjct: 7 LACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICN 62
BLAST of CB305083 vs. ExPASy Swiss-Prot
Match: RLA1_CAEEL (60S acidic ribosomal protein P1 OS=Caenorhabditis elegans GN=rla-1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.837e-11 Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = -3 Query: 396 LACTYACLILHDDGIAITTDKIAQLVKAANVSIESYWPSLFAKLLEKRNLDDLI 557 LAC YA LIL DD +AIT +KIA L+KAANV E YWP LFAK LE ++ +LI Sbjct: 7 LACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKALEGVDVKNLI 60 The following BLAST results are available for this feature:
BLAST of CB305083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305083 ID=CB305083; Name=CB305083; organism=Citrus sinensis; type=EST; length=559bpback to top |