CB610826

Overview
NameCB610826
Unique NameCB610826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 72/80 (90.00%), Postives = 78/80 (97.50%), Query Frame = 2
Query:  119 GEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            G+GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR++ DP
Sbjct:    3 GKGPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKYDDP 82          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.087e-36
Identity = 74/78 (94.87%), Postives = 75/78 (96.15%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            EG AIGIDLGTTYSCVGVWQ+DRVEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD
Sbjct:    5 EGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSD 82          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
The following BLAST results are available for this feature:
BLAST of CB610826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_CHICK7.175e-3790.00Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP70_SOYBN2.087e-3694.87Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP7C_SAGOE4.650e-3692.31Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT4.650e-3692.31Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB4.650e-3692.31Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]
HSP7C_ORYLA4.650e-3692.31Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7C_MOUSE4.650e-3692.31Heat shock cognate 71 kDa protein OS=Mus musculus ... [more]
HSP7C_HUMAN4.650e-3692.31Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE4.650e-3692.31Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR4.650e-3692.31Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610826 ID=CB610826; Name=CB610826; organism=Citrus sinensis; type=EST; length=722bp
GGGGACGGAAACGAACTAACAATCAATAAGTAAACACTAAAGCTCGCAAA
TCATCCGTGCTTTTTTTCTTTTTTTATTGTTGATAGATTCTTGATTTTGT
TAATCGATGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTGACTTGGG
CACGACTTACTCCTGTGTCGGTGTGTGGCAACATGATCGAGTTGAGATCA
TCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGCGTTTACT
GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAGGTCGCCATGAA
CCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGGCGATTCA
GTGATCCTTCTGCTGGTGCTGGTAGCGGTGCTGGCCCCAAGATTGAGGAG
GTGGATTAAATTTGAGGATTTATGCTTAATGTTGGTTAATGATTAGGGGT
TGAGTTGGGAGTGTGATCTTTTCTTCCTTTTCCTGCTTCTGTTACATATA
AAACTGTTTCCTGGTGTCTGCATAAAGATATTATGTTTTTAAGCAATGTC
TTATTTTTCCTTCCATCAGTTCTATCGATTTTGCGATACTTTTGCTTCTG
CATTGCTAGAAAATGCGATGAGCTTAAAAAAGAGAATGCAAAAACCATAC
AGCCAGCTGTTCATAATAACAAGTTGGTGTTTAATCTGTTGATATTATTT
TGAGGAACCCACATGGTCGGGG
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