CB610826

Overview
NameCB610826
Unique NameCB610826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSDP
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDP 84          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.155e-41
Identity = 81/83 (97.59%), Postives = 82/83 (98.80%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSD 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD
Sbjct:    1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSD 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 80/83 (96.39%), Postives = 82/83 (98.80%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF+D
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTD 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGRRFSD
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVALNPINTVFDAKRLIGRRFSD 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.190e-41
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSD 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.190e-41
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 2
Query:  116 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFS P
Sbjct:    3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSSP 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 6.933e-40
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            MAGKGEGPAIGIDLGTTYS VGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD
Sbjct:    1 MAGKGEGPAIGIDLGTTYSRVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSD 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.206e-37
Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            E PAIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP +TVFDAKRLIGR+FSDP
Sbjct:    4 EAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRHTVFDAKRLIGRKFSDP 82          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.175e-37
Identity = 74/84 (88.10%), Postives = 77/84 (91.67%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            M  K EG AIGIDLGTTYSCVGVW HDRVE+IANDQGNRTTPSYVAFT+TERLIGD+AKNQVAMNP NTVFDAKRLIGRRF DP
Sbjct:    1 MENKIEGVAIGIDLGTTYSCVGVWLHDRVEVIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNPDNTVFDAKRLIGRRFQDP 84          
The following BLAST results are available for this feature:
BLAST of CB610826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_PETHY4.343e-4297.62Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP72_ARATH2.155e-4197.59Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_ARATH4.801e-4196.39Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP73_ARATH6.271e-4196.39Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP71_SOLLC6.271e-4196.39Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP72_SOLLC8.190e-4196.39Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP70_MAIZE8.190e-4198.77Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP7E_SPIOL6.933e-4096.39Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_CHLRE4.206e-3793.67Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_PYRSA7.175e-3788.10Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610826 ID=CB610826; Name=CB610826; organism=Citrus sinensis; type=EST; length=722bp
GGGGACGGAAACGAACTAACAATCAATAAGTAAACACTAAAGCTCGCAAA
TCATCCGTGCTTTTTTTCTTTTTTTATTGTTGATAGATTCTTGATTTTGT
TAATCGATGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTGACTTGGG
CACGACTTACTCCTGTGTCGGTGTGTGGCAACATGATCGAGTTGAGATCA
TCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGCGTTTACT
GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAGGTCGCCATGAA
CCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGGCGATTCA
GTGATCCTTCTGCTGGTGCTGGTAGCGGTGCTGGCCCCAAGATTGAGGAG
GTGGATTAAATTTGAGGATTTATGCTTAATGTTGGTTAATGATTAGGGGT
TGAGTTGGGAGTGTGATCTTTTCTTCCTTTTCCTGCTTCTGTTACATATA
AAACTGTTTCCTGGTGTCTGCATAAAGATATTATGTTTTTAAGCAATGTC
TTATTTTTCCTTCCATCAGTTCTATCGATTTTGCGATACTTTTGCTTCTG
CATTGCTAGAAAATGCGATGAGCTTAAAAAAGAGAATGCAAAAACCATAC
AGCCAGCTGTTCATAATAACAAGTTGGTGTTTAATCTGTTGATATTATTT
TGAGGAACCCACATGGTCGGGG
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