CB610826

Overview
NameCB610826
Unique NameCB610826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.650e-36
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.074e-36
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            +G ++GIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP
Sbjct:    5 QGASVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPANTVFDAKRLIGRKFNDP 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 7.932e-36
Identity = 72/75 (96.00%), Postives = 75/75 (100.00%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGR+FSD
Sbjct:    3 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSD 77          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 2
Query:  107 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            M  K + PA+GIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF D
Sbjct:    1 MTTKLDSPAVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRRFDD 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 2
Query:  125 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 2
Query:  125 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 2
Query:  125 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 2
Query:  125 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FDAKRLIGR+F D
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFED 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.353e-35
Identity = 71/78 (91.03%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTT+SCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRF D
Sbjct:    4 KGPAVGIDLGTTFSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 81          
The following BLAST results are available for this feature:
BLAST of CB610826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_CHICK4.650e-3692.31Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP7C_BOVIN4.650e-3692.31Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP70_ACHKL6.074e-3688.61Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HS7C1_DICDI7.932e-3696.00Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP70_BLAEM1.036e-3586.75Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP72_RAT1.353e-3592.21Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_HUMAN1.353e-3592.21Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI1.353e-3592.21Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN1.353e-3592.21Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_ECHGR1.353e-3591.03Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610826 ID=CB610826; Name=CB610826; organism=Citrus sinensis; type=EST; length=722bp
GGGGACGGAAACGAACTAACAATCAATAAGTAAACACTAAAGCTCGCAAA
TCATCCGTGCTTTTTTTCTTTTTTTATTGTTGATAGATTCTTGATTTTGT
TAATCGATGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTGACTTGGG
CACGACTTACTCCTGTGTCGGTGTGTGGCAACATGATCGAGTTGAGATCA
TCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGCGTTTACT
GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAGGTCGCCATGAA
CCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGGCGATTCA
GTGATCCTTCTGCTGGTGCTGGTAGCGGTGCTGGCCCCAAGATTGAGGAG
GTGGATTAAATTTGAGGATTTATGCTTAATGTTGGTTAATGATTAGGGGT
TGAGTTGGGAGTGTGATCTTTTCTTCCTTTTCCTGCTTCTGTTACATATA
AAACTGTTTCCTGGTGTCTGCATAAAGATATTATGTTTTTAAGCAATGTC
TTATTTTTCCTTCCATCAGTTCTATCGATTTTGCGATACTTTTGCTTCTG
CATTGCTAGAAAATGCGATGAGCTTAAAAAAGAGAATGCAAAAACCATAC
AGCCAGCTGTTCATAATAACAAGTTGGTGTTTAATCTGTTGATATTATTT
TGAGGAACCCACATGGTCGGGG
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