CB610826

Overview
NameCB610826
Unique NameCB610826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35
Identity = 70/78 (89.74%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GPA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPTNT+FDAKRLIGRRF D
Sbjct:    3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTIFDAKRLIGRRFED 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35
Identity = 70/76 (92.11%), Postives = 75/76 (98.68%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            +IGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAF +TERLIGDAAKNQVAMNPTNT+FDAKRLIGR+FSDP
Sbjct:    4 SIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFSDP 79          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.308e-35
Identity = 71/76 (93.42%), Postives = 75/76 (98.68%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR+FSDP
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFSDP 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 71/75 (94.67%), Postives = 75/75 (100.00%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            AIGIDLGTTYSCVGVWQ++RVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNPTNTVFDAKRLIGR+FSD
Sbjct:    6 AIGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            + PAIGIDLGTTYSCVGV+QH +VEIIAN+QGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+NTVFDAKRLIGR+F+DP
Sbjct:    3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPSNTVFDAKRLIGRKFNDP 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP
Sbjct:    5 KGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDP 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.937e-35
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP
Sbjct:    5 KGTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDP 83          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 2
Query:  125 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            GPAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNT+FD KRLIGR+F D
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDRKRLIGRKFED 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35
Identity = 70/78 (89.74%), Postives = 76/78 (97.44%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            +GP+IGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+D
Sbjct:    5 KGPSIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNTVFDAKRLIGRKFND 82          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 2
Query:  122 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            +G AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGR+F+DP
Sbjct:    5 KGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDP 83          
The following BLAST results are available for this feature:
BLAST of CB610826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_ICTPU1.767e-3589.74Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HS7C2_DICDI1.767e-3592.11Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_TRYCR2.308e-3593.42Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP74_TRYBB3.014e-3594.67Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_HYDMA3.937e-3588.61Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HS71L_PIG3.937e-3589.87Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_BOVIN3.937e-3589.87Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP72_MOUSE5.142e-3590.91Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP70_ONCTS5.142e-3589.74Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS71L_RAT5.142e-3589.87Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610826 ID=CB610826; Name=CB610826; organism=Citrus sinensis; type=EST; length=722bp
GGGGACGGAAACGAACTAACAATCAATAAGTAAACACTAAAGCTCGCAAA
TCATCCGTGCTTTTTTTCTTTTTTTATTGTTGATAGATTCTTGATTTTGT
TAATCGATGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTGACTTGGG
CACGACTTACTCCTGTGTCGGTGTGTGGCAACATGATCGAGTTGAGATCA
TCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGCGTTTACT
GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAGGTCGCCATGAA
CCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGGCGATTCA
GTGATCCTTCTGCTGGTGCTGGTAGCGGTGCTGGCCCCAAGATTGAGGAG
GTGGATTAAATTTGAGGATTTATGCTTAATGTTGGTTAATGATTAGGGGT
TGAGTTGGGAGTGTGATCTTTTCTTCCTTTTCCTGCTTCTGTTACATATA
AAACTGTTTCCTGGTGTCTGCATAAAGATATTATGTTTTTAAGCAATGTC
TTATTTTTCCTTCCATCAGTTCTATCGATTTTGCGATACTTTTGCTTCTG
CATTGCTAGAAAATGCGATGAGCTTAAAAAAGAGAATGCAAAAACCATAC
AGCCAGCTGTTCATAATAACAAGTTGGTGTTTAATCTGTTGATATTATTT
TGAGGAACCCACATGGTCGGGG
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