CB610826 | Citrus Genome Database

Overview


Name	CB610826
Unique Name	CB610826
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	722

Libraries


Library Name	Type
Mature Albedo	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 2

Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 2

Query:  128 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78

[Close]

BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 2

Query:  128 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            PAIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGD AKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    2 PAIGIDLGTTYSCVGVYQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDPAKNQVAMNPRNTVFDAKRLIGRKYDDP 78

The following BLAST results are available for this feature:

BLAST of CB610826 vs. ExPASy Swiss-Prot

BLAST of CB610826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
HSP71_PONAB	5.685e-34	90.79	Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP...	[more]
HSP71_HUMAN	5.685e-34	90.79	Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN...	[more]
HSP71_CERAE	5.685e-34	90.79	Heat shock 70 kDa protein 1 OS=Cercopithecus aethi...	[more]
HSP71_CANFA	5.685e-34	90.79	Heat shock 70 kDa protein 1 OS=Canis familiaris GN...	[more]
HS71B_PIG	5.685e-34	90.79	Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA...	[more]
HS71B_BOVIN	5.685e-34	90.79	Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA...	[more]
HS71B_BOSMU	5.685e-34	90.79	Heat shock 70 kDa protein 1B OS=Bos mutus grunnien...	[more]
HS71A_BOVIN	5.685e-34	90.79	Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA...	[more]
HSP75_DROME	7.425e-34	88.31	Major heat shock 70 kDa protein Bc OS=Drosophila m...	[more]
HSP74_DROME	7.425e-34	88.31	Major heat shock 70 kDa protein Bbb OS=Drosophila ...	[more]

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Properties


Property Name	Value
Genbank description	ALBEDO0002_IVaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D04 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB610826 ID=CB610826; Name=CB610826; organism=Citrus sinensis; type=EST; length=722bp
GGGGACGGAAACGAACTAACAATCAATAAGTAAACACTAAAGCTCGCAAA
TCATCCGTGCTTTTTTTCTTTTTTTATTGTTGATAGATTCTTGATTTTGT
TAATCGATGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTGACTTGGG
CACGACTTACTCCTGTGTCGGTGTGTGGCAACATGATCGAGTTGAGATCA
TCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGCGTTTACT
GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAGGTCGCCATGAA
CCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGGCGATTCA
GTGATCCTTCTGCTGGTGCTGGTAGCGGTGCTGGCCCCAAGATTGAGGAG
GTGGATTAAATTTGAGGATTTATGCTTAATGTTGGTTAATGATTAGGGGT
TGAGTTGGGAGTGTGATCTTTTCTTCCTTTTCCTGCTTCTGTTACATATA
AAACTGTTTCCTGGTGTCTGCATAAAGATATTATGTTTTTAAGCAATGTC
TTATTTTTCCTTCCATCAGTTCTATCGATTTTGCGATACTTTTGCTTCTG
CATTGCTAGAAAATGCGATGAGCTTAAAAAAGAGAATGCAAAAACCATAC
AGCCAGCTGTTCATAATAACAAGTTGGTGTTTAATCTGTTGATATTATTT
TGAGGAACCCACATGGTCGGGG