CB610826

Overview
NameCB610826
Unique NameCB610826
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.812e-33
Identity = 68/76 (89.47%), Postives = 73/76 (96.05%), Query Frame = 2
Query:  128 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            PAIGIDLGTTYSCVGV+Q+ +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP N+VFDAKRLIGRRF D
Sbjct:    2 PAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDAKRLIGRRFDD 77          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33
Identity = 67/76 (88.16%), Postives = 72/76 (94.74%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSC GV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGR++ DP
Sbjct:    3 AIGIDLGTTYSCFGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNTVFDAKRLIGRKYDDP 78          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33
Identity = 68/76 (89.47%), Postives = 72/76 (94.74%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            AIGIDLGTTYSCVGV+QH +VEIIANDQGNRTTPS VAFTDTERLIGDAAKNQVA+NP NTVFDAKRLIGR+F DP
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSSVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDP 81          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 67/79 (84.81%), Postives = 72/79 (91.14%), Query Frame = 2
Query:  119 GEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            G+ PAIGIDLGTTYSCVGVWQ+ +VEIIANDQGNRTTPSYVAF +TERLIGD AKNQVAMN  NTVFDAKRLIGR+F D
Sbjct:    2 GKIPAIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDAKRLIGRKFDD 80          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            +IGIDLGTTYSCVG + ++RVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGRRF+DP
Sbjct:    4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDP 79          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32
Identity = 65/76 (85.53%), Postives = 73/76 (96.05%), Query Frame = 2
Query:  128 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            PAIGIDLGTTYSCVG+++ DR+EIIANDQGNRTTPS+VAFTDTERLIGD+AKNQVA+NP NTVFDAKRLIGR+F D
Sbjct:    3 PAIGIDLGTTYSCVGIYRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDSAKNQVAINPHNTVFDAKRLIGRKFQD 78          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.119e-32
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            AIGIDLGTTYSCVGV+ H +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDA RLIGR+F D
Sbjct:    5 AIGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTVFDANRLIGRKFDD 79          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 66/76 (86.84%), Postives = 72/76 (94.74%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDP 358
            +IGIDLGTTYSCVG + ++RVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NT+FDAKRLIGR+F DP
Sbjct:    4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDP 79          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            AIGIDLGTTYSCVGVW+++ V+IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA NP NTVFDAKRLIGR+F++
Sbjct:   17 AIGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFTE 91          
BLAST of CB610826 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 2
Query:  131 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSD 355
            AIGIDLGTTYSCVGVW+++ V+IIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA NP NTVFDAKRLIGR+F++
Sbjct:   17 AIGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFTE 91          
The following BLAST results are available for this feature:
BLAST of CB610826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP68_DROME4.812e-3389.47Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP70_CERCA6.285e-3388.16Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HS71A_PIG6.285e-3389.47Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HSP7B_DROME1.400e-3284.81Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP71_SCHPO1.400e-3288.16Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_CLAHE1.829e-3285.53Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_BRUMA3.119e-3289.33Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP72_SCHPO4.074e-3286.84Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_PLAFA4.074e-3286.67Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PLACB4.074e-3286.67Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]

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Properties
Property NameValue
Genbank descriptionALBEDO0002_IVaF_D04 Mature Albedo Citrus sinensis cDNA clone ALBEDO0002_IVaF_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB610826 ID=CB610826; Name=CB610826; organism=Citrus sinensis; type=EST; length=722bp
GGGGACGGAAACGAACTAACAATCAATAAGTAAACACTAAAGCTCGCAAA
TCATCCGTGCTTTTTTTCTTTTTTTATTGTTGATAGATTCTTGATTTTGT
TAATCGATGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTGACTTGGG
CACGACTTACTCCTGTGTCGGTGTGTGGCAACATGATCGAGTTGAGATCA
TCGCTAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGCGTTTACT
GACACTGAGCGTTTGATCGGTGACGCTGCCAAGAACCAGGTCGCCATGAA
CCCCACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGGCGATTCA
GTGATCCTTCTGCTGGTGCTGGTAGCGGTGCTGGCCCCAAGATTGAGGAG
GTGGATTAAATTTGAGGATTTATGCTTAATGTTGGTTAATGATTAGGGGT
TGAGTTGGGAGTGTGATCTTTTCTTCCTTTTCCTGCTTCTGTTACATATA
AAACTGTTTCCTGGTGTCTGCATAAAGATATTATGTTTTTAAGCAATGTC
TTATTTTTCCTTCCATCAGTTCTATCGATTTTGCGATACTTTTGCTTCTG
CATTGCTAGAAAATGCGATGAGCTTAAAAAAGAGAATGCAAAAACCATAC
AGCCAGCTGTTCATAATAACAAGTTGGTGTTTAATCTGTTGATATTATTT
TGAGGAACCCACATGGTCGGGG
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