CF417386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.378e-66 Identity = 120/217 (55.30%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLSKYPWFGFSKPKMD 648 DELHHSGWN+CSSC+ D S +R L+LPSL+S RIY+VD +PRAP LHK VEP D+ K GL+ PHT+HCL SG I++S +GD GN +G GF+LLD E F V G WE+PG + FGYDFWYQPRH MIS+ WGAP A GFN V G YG+ L V+ W + QTLDLG G IPLE+RFLHDP+ G L + + PK D Sbjct: 70 DELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMISTMGDPSGNGKG-GFVLLDGETFEVIGNWEQPGDAAPFGYDFWYQPRHNVMISTEWGAPKALGNGFNPADVKAGHYGQRLHVWDWTTHKRIQTLDLGEEGAIPLEVRFLHDPAAAEGFVGCALQSTVFRFYKTPKGD 285
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP_CAEEL (Putative selenium-binding protein OS=Caenorhabditis elegans GN=R11G10.2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12 Identity = 58/197 (29.44%), Postives = 100/197 (50.76%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSA-QRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLA--SGDILVSCLGDKDGNAEGNGFLLLDSEFNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGF---NLQHVSDGLYGRHLFVYSWPDGELKQTLDLGN-TGLIPLEIRFLHD 570 DE W + G+ + RR +++P + SG+IY++ + + K + ++++K +S P+ L + VS LGD+ GN +G+ F+L+D + +P S +G DF QPRH MISS WG P GF L++VS+ +G L V+ +L Q+++L G + + ++FLH+ Sbjct: 134 DEPGRMNWAKSAESLGEMNKFVRRNIIVPCMNSGKIYVIAFENEKLW--IEKEIRNDELIRKD-VSCPYAVRSLPLKGAPVHVSTLGDRFGNGKGD-FILIDRRTWEVRKKSEPTFSD-YGGDFSLQPRHNLMISSEWGHPRLLRDGFMPSELENVSES-FGARLHVWQISPPKLIQSINLDTCDGSLVICVKFLHN 324 The following BLAST results are available for this feature:
BLAST of CF417386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417386 ID=CF417386; Name=CF417386; organism=Citrus sinensis; type=EST; length=712bpback to top |