CF417386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 2.476e-105 Identity = 156/203 (76.85%), Postives = 182/203 (89.66%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSEFNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLS 609 DELHHSGWNSCSSC+GD+S RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I KTGL++PHTAHCLA+G+ILVSCLGD++GNA+GNGFLLLDS+FN+K RWEKPGHSP +GYDFWYQPRHKTMIS+SWGAP AF+KGFNLQHV+DGLYG HL VYSWP GE+KQ +DLG TGL+PLEIRFLHDPSKD G LS Sbjct: 87 DELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWEKPGHSPLYGYDFWYQPRHKTMISTSWGAPKAFSKGFNLQHVADGLYGSHLHVYSWPGGEIKQLIDLGPTGLLPLEIRFLHDPSKDTGFVGSALS 289 HSP 2 Score: 50.8322 bits (120), Expect = 2.476e-105 Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 3 Query: 618 MVRXFKTQDGSWNHEVAISVKSLKVQNWILP 710 M+R FK D +W+HEV ISVK LKV+NWILP Sbjct: 292 MIRFFKNSDETWSHEVVISVKPLKVENWILP 322
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.790e-70 Identity = 125/215 (58.14%), Postives = 147/215 (68.37%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLSKYPWFGFSKPK 642 DELHHSGWN+CSSCYGDSS R L+LP L+S RIY+VD +PRAP +HK VEP ++ K GL+ PHT+HCL G+I++S LGD GN +G GF+LLD E F VKG WE G S FGYDFWYQPRH MIS+ WGAP AF GF ++ V G YG L V+ W + L QT+DLG GLIPLEIRFLH+P D G LS F F K K Sbjct: 69 DELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMISSLGDPCGNGKG-GFVLLDGETFEVKGNWEVEGESAQFGYDFWYQPRHNVMISTEWGAPKAFALGFKMEDVQAGHYGHSLNVWDWTEHRLVQTIDLGKDGLIPLEIRFLHNPDADQGLVGCALSS-SIFRFYKEK 281 HSP 2 Score: 31.9574 bits (71), Expect = 1.790e-70 Identity = 13/29 (44.83%), Postives = 17/29 (58.62%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K +DG W E I V S KV+ W +P Sbjct: 276 RFYKEKDGKWAAEKVIQVPSKKVEGWPMP 304
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 1.498e-69 Identity = 123/215 (57.21%), Postives = 146/215 (67.91%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLSKYPWFGFSKPK 642 DELHHSGWN+CSSCYGDSS R L+LP L+S R+Y+VD +PRAP LHK VEP ++ K GL+ HT+HCL G+I++S LGD GN +G GF+LLD E F VKG WE G + FGYDFWYQPRH MIS+ WGAP AF GF ++ V G YG L V+ W + L QT+DLG GLIPLEIRFLH+P D G LS F F K K Sbjct: 69 DELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMISALGDPCGNGKG-GFVLLDGETFEVKGNWEAEGETAQFGYDFWYQPRHNVMISTEWGAPKAFALGFKMEDVLAGQYGHSLNVWDWTEHRLVQTIDLGKDGLIPLEIRFLHNPDADQGLVGCALSS-SIFRFYKEK 281 HSP 2 Score: 33.4982 bits (75), Expect = 1.498e-69 Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K +DG W E I V S KV+ W LP Sbjct: 276 RFYKEKDGKWAAEKVIQVPSKKVEGWALP 304
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 5.667e-69 Identity = 119/197 (60.41%), Postives = 142/197 (72.08%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIG 588 DELHHSGWN+CSSC+GDS+ R L+LPSL+S R+Y+VD PRAP LHKVVEP +I K LSY HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WE+PG + GYDFWYQPRH MIS+ W AP GFN V GLYG+HL+V+ W E QTL L GLIPLEIRFLH+P+ D G Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMISALGDPRGNGKG-GFVLLDGETFEVKGTWEQPGGAAPMGYDFWYQPRHNVMISTEWAAPNVLRDGFNPADVEAGLYGQHLYVWDWQRHERVQTLTL-QDGLIPLEIRFLHNPAADQG 264 HSP 2 Score: 33.4982 bits (75), Expect = 5.667e-69 Identity = 14/29 (48.28%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K Q G+W+ E I V KV+ WILP Sbjct: 276 RFYKNQGGTWSVEKVIQVPPKKVKGWILP 304 HSP 3 Score: 22.3274 bits (46), Expect = 5.667e-69 Identity = 9/17 (52.94%), Postives = 11/17 (64.71%), Query Frame = 2 Query: 587 GFVGCALASTHGSXFQN 637 GFVGCAL S ++N Sbjct: 264 GFVGCALGSNIQRFYKN 280
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.251e-68 Identity = 118/204 (57.84%), Postives = 140/204 (68.63%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLS 609 DELHHSGWN+CSSC+GDS+ R L+LPS++S RIY+VD PRAP LHKV+EP +I K L HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WEKPG GYDFWYQPRH M+S+ W AP F GFN HV GLYG H+ V+ W E+ QTL + GLIPLEIRFLHDP G LS Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMISSLGDPQGNGKG-GFVLLDGETFEVKGTWEKPGGEAPMGYDFWYQPRHNIMVSTEWAAPNVFKDGFNPAHVEAGLYGSHIHVWDWQRHEIIQTLQM-KDGLIPLEIRFLHDPDATQGFVGCALS 271 HSP 2 Score: 33.113 bits (74), Expect = 1.251e-68 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K + G+W+ E I V S KV+ W+LP Sbjct: 276 RFYKNEGGTWSVEKVIQVPSKKVKGWMLP 304 HSP 3 Score: 22.7126 bits (47), Expect = 1.251e-68 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 2 Query: 587 GFVGCALASTHGSXFQN 637 GFVGCAL+S ++N Sbjct: 264 GFVGCALSSNIQRFYKN 280
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 246.514 bits (628), Expect = 1.251e-68 Identity = 120/204 (58.82%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLS 609 DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIY+VD PRAP LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD E F VKG WE+PG + GYDFWYQPRH MIS+ W AP GFN V GLYG HL+V+ W E+ QTL L GLIPLEIRFLH+P G LS Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDGETFEVKGTWERPGGAAPLGYDFWYQPRHNVMISTEWAAPNVLRDGFNPADVEAGLYGSHLYVWDWQRHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALS 271 HSP 2 Score: 31.5722 bits (70), Expect = 1.251e-68 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K + G+W+ E I V KV+ W+LP Sbjct: 276 RFYKNEGGTWSVEKVIQVPPKKVKGWLLP 304 HSP 3 Score: 24.6386 bits (52), Expect = 1.251e-68 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 587 GFVGCALASTHGSXFQN 637 GFVGCAL+ST ++N Sbjct: 264 GFVGCALSSTIQRFYKN 280
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 2.131e-68 Identity = 120/215 (55.81%), Postives = 145/215 (67.44%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLSKYPWFGFSKPK 642 DELHHSGWN+CSSCYGD+S R L+LP L+S RIY+VD +PRAP +HK VEP ++ K GL+ HT+HCL G+I++S +GD GN +G GF+LLD E F VKG WE G + FGYDFWYQPRH MIS+ WGAP AF GF ++ V G+YG L V+ W + QT+DLG GLIPLEIRFLHDP G LS F F K K Sbjct: 69 DELHHSGWNTCSSCYGDASKVRNKLILPCLISSRIYVVDVGTDPRAPRIHKTVEPYEVFWKCGLANLHTSHCLGCGEIMISSIGDPYGNGKG-GFVLLDGETFEVKGNWEAEGEAAPFGYDFWYQPRHNVMISTEWGAPKAFALGFKMEEVQAGMYGHSLNVWDWTEHRRIQTIDLGEDGLIPLEIRFLHDPDAAQGLVGCALSS-TVFRFYKEK 281 HSP 2 Score: 33.4982 bits (75), Expect = 2.131e-68 Identity = 14/29 (48.28%), Postives = 17/29 (58.62%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K +DG W E I V S KV+ W LP Sbjct: 276 RFYKEKDGKWAAEKVIKVPSKKVEGWALP 304
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 4.725e-68 Identity = 117/204 (57.35%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLS 609 DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+VD PRAP LHKV+E ++I K +S HT+HCLASG+++V+ LGD GN +G+ F+LLD E F VKG WEKPG + GYDFWYQPRH M+S+ W AP F GFN HV GLYG +FV+ W E+ QTL + GLIPLEIRFLHDPS G LS Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGS-FVLLDGETFEVKGTWEKPGGASPMGYDFWYQPRHNVMVSTEWAAPNVFKDGFNPAHVEAGLYGSRIFVWDWQRHEIIQTLQM-TDGLIPLEIRFLHDPSATQGFVGCALS 271 HSP 2 Score: 34.2686 bits (77), Expect = 4.725e-68 Identity = 13/29 (44.83%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K ++G+W+ E I V S KV+ W+LP Sbjct: 276 RFYKNEEGTWSVEKVIQVPSKKVKGWMLP 304
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 6.161e-68 Identity = 118/204 (57.84%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLS 609 DELHHSGWN+CSSC+GDS+ R L+LP L+S RIY+VD PRAP LHKV+E ++I K +S HT+HCLASG+++VS LGD GN +G+ F+LLD E F VKG WEKPG + GYDFWYQPRH M+S+ W AP F GFN HV GLYG +FV+ W E+ QTL + GLIPLEIRFLHDPS G LS Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVSTLGDLQGNGKGS-FVLLDGETFEVKGTWEKPGDAAPMGYDFWYQPRHNVMVSTEWAAPNVFKDGFNPAHVEAGLYGSRIFVWDWQRHEIIQTLQM-TDGLIPLEIRFLHDPSATQGFVGCALS 271 HSP 2 Score: 33.113 bits (74), Expect = 6.161e-68 Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K +G+W+ E I V S KV+ W+LP Sbjct: 276 RFYKNAEGTWSVEKVIQVPSKKVKGWMLP 304
BLAST of CF417386 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.450e-66 Identity = 118/204 (57.84%), Postives = 141/204 (69.12%), Query Frame = 1 Query: 1 DELHHSGWNSCSSCYGDSSAQRRFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIRFLHDPSKDIGXCRLCLS 609 DELHHSGWN+CSSC+GDS+ R LVLPSL+S RIY+VD PRA LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD+E F VKG WE+ G + GYDFWYQPRH MIS+ W AP GFN V GLYG HL+V+ W E+ QTL L GLIPLEIRFLH+P G LS Sbjct: 70 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRALKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDAETFEVKGTWERRGGAAPLGYDFWYQPRHNVMISTEWAAPNVLRDGFNPADVEAGLYGSHLYVWDWQRHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALS 271 HSP 2 Score: 31.5722 bits (70), Expect = 1.450e-66 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 3 Query: 624 RXFKTQDGSWNHEVAISVKSLKVQNWILP 710 R +K + G+W+ E I V KV+ W+LP Sbjct: 276 RFYKNEGGTWSVEKVIQVPPKKVKGWLLP 304 HSP 3 Score: 24.6386 bits (52), Expect = 1.450e-66 Identity = 10/17 (58.82%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 587 GFVGCALASTHGSXFQN 637 GFVGCAL+ST ++N Sbjct: 264 GFVGCALSSTIQRFYKN 280 The following BLAST results are available for this feature:
BLAST of CF417386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417386 ID=CF417386; Name=CF417386; organism=Citrus sinensis; type=EST; length=712bpback to top |