CF503812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_DATST (Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.440e-38 Identity = 81/153 (52.94%), Postives = 103/153 (67.32%), Query Frame = 1 Query: 52 RVTTVVTKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 R +++D L +FM S I ++ + ++ PFY++DLG VVSL + + LP I P YAVKCN GSNFDC SR+EIE VL LG+SPDRI++ANPCKP S I +AA VGVNLTT DS +E+ KIR HPK +LL+RIK DD A Sbjct: 36 RKVVPLSRDALQDFMVSIITQKLQDEKQPFYVLDLGEVVSLMDQWNAGLPNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIEYVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTFDSEDEVYKIRKHHPKCELLLRIKPMDDGNA 188
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_SOLLC (Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.079e-37 Identity = 81/156 (51.92%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 43 GGQRVTTVVTKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 G R ++KD L +FM S I ++ + D+ PFY++DLG VVSL S LP I P YAVKCN GSNFDC SR+EIE VL G+SPDRI++ANPCKP S I +A +GVNLTT DS +E+ KIR HPK +LL+RIK D A Sbjct: 33 GHTRKVVPLSKDALQDFMVSIITQKLQDDKQPFYVLDLGEVVSLMEQWNSALPNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIEYVLSHGISPDRIVFANPCKPESDIIFAEKIGVNLTTYDSEDEVYKIRKHHPKCELLLRIKPMTDGNA 188
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_CAPAN (Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.946e-35 Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 1 Query: 1 GTPSTLLHLDAQVMGGQRVTTVVTKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 G P + A+ R ++KD L +FM S I ++ + ++ PFY++DLG VVSL + LP + P YAVKCN GSNF C SR+EIE VL LG+SP+RI++ANPCKP S I +A VGVNLTT DS +E+ KI+ HPK +LL+RIK +D A Sbjct: 23 GAPPSTAAAAAENGDTTRKVVPLSKDALQDFMVSIITQKLQGEKKPFYVLDLGEVVSLMDQWNVALPNVRPFYAVKCNPEPSFLSMLAAMGSNFVCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNA 192
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_YEAST (Ornithine decarboxylase OS=Saccharomyces cerevisiae GN=SPE1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.555e-29 Identity = 62/126 (49.21%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 127 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDS 504 +E F++ DLG V L+N+ + LP I P YAVKCN G NFDC S+ EI+ VL + +SPDRI+YANPCK S I+YAAS V +T D+VEEL KI+ +HP+S LL+RI + D + Sbjct: 83 EENSFFICDLGEVKRLFNNWVKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDRVLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIATDDST 208
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_DICDI (Probable ornithine decarboxylase OS=Dictyostelium discoideum GN=odc PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.930e-28 Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 127 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDS 504 D F++ D+GV++ + + NLP + P+YAVKCN G+N+DC SR+EIE+VL LGV P RIIYANPCK +S +K+A + V L T D++ EL+KI + P+++L++RI +PDDS Sbjct: 83 DRDAFFVADVGVIIKQWQKWVKNLPNVKPYYAVKCNPTVGVLRVLDALGTNYDCASRTEIESVLNLGVDPSRIIYANPCKQISALKFARAHNVKLMTFDNLSELEKIEKFFPEAELVLRI-APDDS 207
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_SCHPO (Ornithine decarboxylase OS=Schizosaccharomyces pombe GN=spe1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 4.345e-27 Identity = 60/141 (42.55%), Postives = 86/141 (60.99%), Query Frame = 1 Query: 88 EFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 E ++ ++ + D F++ DL V + LP + P YAVKCN G+ FDC S+ E+E +L LGVSPDRI+YANPCK +++++YAAS G+NL T D+ +EL K++ HP S LL+RI S DDS + Sbjct: 52 EEIERAAVRGEPADSDAFFVADLNGVYRQLLRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGFDCASKGELEQILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRI-STDDSNS 191
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_RAT (Ornithine decarboxylase OS=Rattus norvegicus GN=Odc1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.195e-26 Identity = 63/128 (49.22%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 127 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 D+ FY+ DLG V+ + + LP + P YAVKCN G+ FDC S++EI+ V LGV P+RIIYANPCK VS IKYAAS GV + T DS EL K+ HPK+ L++RI + DDS A Sbjct: 36 DKDAFYVADLGDVLKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQLVQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRI-ATDDSKA 162
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_MUSPA (Ornithine decarboxylase OS=Mus pahari GN=Odc1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.195e-26 Identity = 62/128 (48.44%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 127 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 D+ FY+ DLG ++ + + LP + P YAVKCN G+ FDC S++EI+ V LGV P+RIIYANPCK VS IKYAAS GV + T DS EL K+ HPK+ L++RI + DDS A Sbjct: 36 DKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQLVQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLRI-ATDDSKA 162
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_HUMAN (Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.070e-25 Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 127 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 D+ FY+ DLG ++ + + LP + P YAVKCN G+ FDC S++EI+ V LGV P+RIIYANPCK VS IKYAA+ GV + T DS EL K+ HPK+ L++RI + DDS A Sbjct: 36 DKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRI-ATDDSKA 162
BLAST of CF503812 vs. ExPASy Swiss-Prot
Match: DCOR_BOVIN (Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.070e-25 Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = 1 Query: 127 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNXXXXXXXXXXXXGSNFDCGSRSEIEAVLLLGVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGA 510 D+ FY+ DLG ++ + + LP + P YAVKCN G+ FDC S++EI+ V LGV P+RIIYANPCK VS IKYAA+ GV + T DS EL K+ HPK+ L++RI + DDS A Sbjct: 36 DKDAFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRI-ATDDSKA 162 The following BLAST results are available for this feature:
BLAST of CF503812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503812 ID=CF503812; Name=CF503812; organism=Citrus sinensis; type=EST; length=511bpback to top |