CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LISIN (50S ribosomal protein L19 OS=Listeria innocua GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16 Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 394 LDKEAVENVKSQR--EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 ++K E KSQ ++P +PG V++ + E R R+ +G+VI RR AGIS TF +R++ GVGVE FP+++P I +++V+ + KVRRAKLYYLR+ Sbjct: 1 MNKLIDEITKSQLNPDVPSFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETFTVRKISNGVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRN 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BREBN (50S ribosomal protein L19 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16 Identity = 42/97 (43.30%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 +E + +++IP +PG V++ V + E +R R+ +G+ I RR GIS TF R++ GVGVE FP+++P I +I+++ KVRRAKLYYLRD++ Sbjct: 8 LEKAQLKQDIPAFRPGDTVRVHVKVIEGQRERIQLFEGVCIRRRGTGISETFTARKISYGVGVERTFPVHTPKIDKIEIVRHGKVRRAKLYYLRDRV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BACHD (50S ribosomal protein L19 OS=Bacillus halodurans GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16 Identity = 42/95 (44.21%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 409 VENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 + N + + ++P +PG +++ V + E R R+ +G+VI RR G+S TF +R++ GVGVE FPL+SP I +I+V + KVRRAKLYYLR+ Sbjct: 8 ITNEQLRTDLPSFRPGDTLRVHVKVIEGSRERIQVFEGVVIKRRGTGVSETFTVRKISYGVGVERTFPLHSPKIDKIEVKRRGKVRRAKLYYLRN 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BACCN (50S ribosomal protein L19 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16 Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = 1 Query: 412 ENVKSQ--REIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 E KSQ ++P +PG +++ V + E R R+ +G+VI RR GIS TF +R++ GVGVE FP+++P I +I+VL + KVRRAKLYYLR+ Sbjct: 7 EITKSQLKTDLPSFRPGDTLRVHVKVVEGTRERIQIFEGVVIKRRGGGISETFTVRKVSYGVGVERTFPIHTPRIAKIEVLRRGKVRRAKLYYLRN 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_ANASP (50S ribosomal protein L19 OS=Anabaena sp. (strain PCC 7120) GN=rplS PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16 Identity = 47/98 (47.96%), Postives = 67/98 (68.37%), Query Frame = 1 Query: 406 AVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 ++E + + +P+I G V++ V I E ++ RV +G+VIARRN GI+ T +RR+ GVGVE +F L+SP I IKVL + KVRRAKLYYLR ++ Sbjct: 9 SIEAEQLKSNLPEIYIGDTVRVGVKIKEGEKYRVQPYEGVVIARRNGGINETITVRRVFQGVGVERVFLLHSPRIDNIKVLRRGKVRRAKLYYLRGRV 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RK19_CHLVU (50S ribosomal protein L19, chloroplastic OS=Chlorella vulgaris GN=rpl19 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.369e-16 Identity = 44/112 (39.29%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD---KLNPLRNK*EAL 726 +A+++ + E+PD++ G +V++ V I E NK+R+ +G VI++ AG ++T +R+ + G+GVE +FPLY+P + ++VL + +V RAKLYYLR K L+ K E L Sbjct: 9 QAIQSGTIKTELPDVRVGDLVRIGVSIQEGNKQRIQPFEGTVISKHQAGANSTVTVRKSLQGIGVERVFPLYAPCVANLQVLRRAQVSRAKLYYLRSRTGKATRLKEKFETL 120
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_PETMO (50S ribosomal protein L19 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rplS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16 Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 406 AVENVKSQREIPDIKPGYIVQLKVVIPEN-----KRRVSTLKGIVIARRNAGISTTFRLRRLVAG-VGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKLNPLRNK 714 AVE + +IP+I+PG V++ V + E + R+ +GIVI R AG+ +F +R++ A VGVE +FP +SP+I I+VL K K RRAKLYYLRD +R K Sbjct: 7 AVETNYKKEDIPEIRPGDTVRVNVKVVEGEGEKKRERIQPFEGIVIKIRGAGLGRSFTVRKMGADRVGVERIFPFHSPSISSIEVLKKGKTRRAKLYYLRDVKGKIRIK 115
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_GEOSM (50S ribosomal protein L19 OS=Geobacter sp. (strain M21) GN=rplS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16 Identity = 41/96 (42.71%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +A+E + ++ IP PG ++++V I E +K R+ +G+ + R+N GI +F +R++ GVGVE +FPL+SP+I I+V+ + +VRRAKLYYLR Sbjct: 5 DAIEMAQMKKNIPKFIPGDTIKVQVKIVEGDKSRIQAFQGVCLGRQNGGIRESFTVRKISNGVGVERVFPLHSPSIEAIEVVTRGQVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_GEOBB (50S ribosomal protein L19 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rplS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16 Identity = 41/96 (42.71%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +A+E + ++ IP PG ++++V I E +K R+ +G+ + R+N GI +F +R++ GVGVE +FPL+SP+I I+V+ + +VRRAKLYYLR Sbjct: 5 DAIEMAQMKKNIPKFIPGDTIKVQVKIVEGDKSRIQAFQGVCLGRQNGGIRESFTVRKISNGVGVERVFPLHSPSIEAIEVVTRGQVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_EXIS2 (50S ribosomal protein L19 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rplS PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16 Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 388 QILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 Q+ + E +KS ++P +PG V++ V + E R R+ +G+VI R GIS TF +R++ GVGVE FPL+SP + +I+V+ KVRRAKLYYLR+ Sbjct: 5 QLFREITQEQIKS--DVPAFRPGDTVRVHVKVVEGTRERIQLFEGVVIKRHGGGISETFTVRKISYGVGVERAFPLHSPRVAQIEVVRYGKVRRAKLYYLRN 104 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |