CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LACLA (50S ribosomal protein L19 OS=Lactococcus lactis subsp. lactis GN=rplS PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.665e-17 Identity = 41/96 (42.71%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 E++ + + +IPD +PG V++ + E R R+ +G+VIAR+N+GI+ T+ +R++ GVGVE +FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 5 ESINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQMFEGVVIARKNSGINETYTVRKISNGVGVERIFPVHTPRVEQIEVIRHGKVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LACLS (50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rplS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 41/96 (42.71%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 E++ + + +IPD +PG V++ + E R R+ +G+VIAR+N+GI+ T+ +R++ GVGVE +FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 5 ESINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISNGVGVERIFPVHTPRVEKIEVIRHGKVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LACLM (50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rplS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 41/96 (42.71%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 E++ + + +IPD +PG V++ + E R R+ +G+VIAR+N+GI+ T+ +R++ GVGVE +FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 5 ESINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISNGVGVERIFPVHTPRVEKIEVIRHGKVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CORU7 (50S ribosomal protein L19 OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=rplS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 M ILDK V+ + + +IP+ + G V + + VI +K RV +G+VI R+ +GI TF +R++ G+GVE P++SPNI +++VL + KVRRAKLYYLRD+ Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTVDVHLKVIEGSKSRVQVFRGVVIKRQGSGIRETFTVRKVSFGIGVERTIPVHSPNIDKLEVLSRGKVRRAKLYYLRDR 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_AZOC5 (50S ribosomal protein L19 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 46/106 (43.40%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I+Q L+ E + + IP+ +PG V + V + E +R RV +G+ IAR G++ F +R++ G GVE +FP+YSP I IKV+ + KVRRAKLYYLRD+ Sbjct: 2 NIIQQLEAEQAARLSETKTIPEFQPGDTVIVNVKVVEGERTRVQAYEGVCIARNGGGLNENFVVRKISYGEGVERVFPIYSPLIDSIKVVRRGKVRRAKLYYLRDR 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_AGRVS (50S ribosomal protein L19 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=rplS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.705e-17 Identity = 42/106 (39.62%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I+Q L+ E ++++R +P+ PG +++ V + E N+ RV +G+ IAR I+ +F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLRD+ Sbjct: 2 NIIQQLEAEQAATIEAKRTLPEFSPGDTLRVNVRVTEGNRTRVQAYEGVCIARSGGSINESFTVRKISYGEGVERVFPVYSPLVESVEVVRRGKVRRAKLYYLRDR 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_ZYMMO (50S ribosomal protein L19 OS=Zymomonas mobilis GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/106 (40.57%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +++Q L+ E + ++ Q+ IPD + G +++ V + E +R R+ +G+ IAR N I ++F +R++ G GVE +FPLYSPN+ I+V+ + VRRAKLYYLR + Sbjct: 2 NLIQTLEAEQIAKLQEQKSIPDFRAGDTLKVGVRVVEGERIRIQFYEGVCIARSNKAIGSSFTVRKISFGEGVERVFPLYSPNVDSIEVVRRGVVRRAKLYYLRGR 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_THISH (50S ribosomal protein L19 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/97 (44.33%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 + +E + RE+PD PG V ++V + E N+ R+ +G+VIA+RN G+++ F +R++ G GVE +F YSP + EI+V + VRRAKLYYLRD Sbjct: 6 QQLEAEQMNREVPDFTPGDTVVVQVKVKEGNRERLQAFEGVVIAKRNRGLNSAFTVRKISHGEGVERVFQTYSPAVAEIQVKRRGSVRRAKLYYLRD 102
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_THEM4 (50S ribosomal protein L19 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVA-GVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 ++++I++K+ V +E+P+ +PG V++ V E NK R +GIVI+ R +G+ TF +RR+ A G+GVE +FPLY+P I +I+V+ + KVRRAKLYYLR+ Sbjct: 5 NLIRIIEKDQV------KEVPEFRPGDTVRVYVKFKEGNKERTQAFEGIVISLRGSGVGKTFTVRRIGANGIGVERIFPLYAPIIEKIEVVRRGKVRRAKLYYLRN 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_SPHAL (50S ribosomal protein L19 OS=Sphingopyxis alaskensis GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 EA E K+ ++IP +PG +++ V + E +R RV +G+ IAR N G+ + F +R++ G GVE +FPLYSPNI I V+ K VRRAKLYYLR + Sbjct: 8 EAEEIAKAGKDIPTFRPGDTLKVGVKVVEGERTRVQNFEGVCIARSNKGMGSNFTVRKMSFGEGVERVFPLYSPNIDSITVVRKGAVRRAKLYYLRGR 105 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |