CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_LEIXX (50S ribosomal protein L19 OS=Leifsonia xyli subsp. xyli GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 45/103 (43.69%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 M ILD+ V+ +++IP + G V++ V I E R RV +G+VIAR G+ TF +R++ VGVE +FP++SP I +I+V+ + VRRAKLYYLR+ Sbjct: 1 MHILDQ--VDAASLKQDIPAFRAGDTVKVHVNIIEGSRSRVQVFQGVVIARSGEGVRETFTVRKISFQVGVERMFPVHSPVIDKIEVVTRGDVRRAKLYYLRE 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_DECAR (50S ribosomal protein L19 OS=Dechloromonas aromatica (strain RCB) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 E E + + IP+ PG V ++V + E N+ R+ +G+VIA+RN G+++ F +R++ +G GVE F YSP + I+V + VRRAKLYYLR++ Sbjct: 8 EQEEIARLGKTIPEFAPGDTVVVQVKVKEGNRERLQAYEGVVIAKRNRGLNSGFTVRKISSGEGVERTFQTYSPLVASIEVKRRGDVRRAKLYYLRER 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CORGB (50S ribosomal protein L19 OS=Corynebacterium glutamicum (strain R) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 43/103 (41.75%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 M ILDK ++ + ++P + G + + V VI R KG+VI R+ GI TF +R++ G+GVE FP++SPNI +I+V+ + VRRAKLYYLR+ Sbjct: 1 MNILDK--IDAASLRDDVPAFRAGDTLDVHVKVIEGTTTRTQLFKGVVIRRQGGGIRETFTVRKVSFGIGVERTFPVHSPNIEKIEVVRRGDVRRAKLYYLRE 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CLAMS (50S ribosomal protein L19 OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 M ILD +V+ + +IPD + G V++ V I E R R+ +GIVI R+ G+ TF +R++ VGVE FP++SP I I+V+ + VRRAKLY+LRD Sbjct: 1 MHILD--SVDKASLRSDIPDFRAGDTVKVHVNIVEGSRSRIQVFQGIVIGRQGEGVRETFCVRKVSFQVGVERTFPVHSPVIDHIEVVTRGDVRRAKLYFLRD 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RK19_NEPOL (50S ribosomal protein L19, chloroplastic OS=Nephroselmis olivacea GN=rpl19 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14 Identity = 41/101 (40.59%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 397 DKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 DKE E ++ R +P I G +V++ ++I E +K RV T +G VI++ AG+++T +R+ GVG+E +F LYSP ++ ++ + K RRAKLYYLR+++ Sbjct: 5 DKEKKEKIE-YRPLPAIAVGDLVKVGLLILEGDKERVQTYEGTVISKHRAGLNSTITVRKTFQGVGIERVFCLYSPRMVFVEFIRHSKARRAKLYYLRNRV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_TREDE (50S ribosomal protein L19 OS=Treponema denticola GN=rplS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENK-RRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 696 IM+I ++ EN P + G V++ I E K R+ +G+VI +N+GI TF +R+ GVGVE +FPL+SP I +++V+ KVRRAKLYY+RDK+ Sbjct: 5 IMKIEAQQKAENP------PVFRVGDTVKVHFKIVEGKTERIQVYEGLVICFKNSGIGRTFTVRKNSYGVGVERVFPLHSPRIAKVEVVRPGKVRRAKLYYIRDKV 104
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STRS7 (50S ribosomal protein L19 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rplS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VI+R+ GIS + +R++ +G+GVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGSRERIQIFEGVVISRKGQGISEMYTVRKISSGIGVERTFPIHTPRVEKIEVVRHGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_STREM (50S ribosomal protein L19 OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=rplS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 36/86 (41.86%), Postives = 59/86 (68.60%), Query Frame = 1 Query: 433 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +IP +PG V++ + E R R+ +G+VI+R+ GIS + +R++ +G+GVE FP+++P + +I+V+ KVRRAKLYYLR Sbjct: 16 DIPSFRPGDTVRVHAKVVEGSRERIQIFEGVVISRKGQGISEMYTVRKISSGIGVERTFPIHTPRVEKIEVVRHGKVRRAKLYYLR 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_POLSJ (50S ribosomal protein L19 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=rplS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 42/106 (39.62%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +++Q L++E + + + IP PG V + V V+ ++RV +G+VIA+RN G++++F +R++ G GVE F +YSP I +I+V + VRRAKLYYLR + Sbjct: 2 NLIQTLEQEEISRLN--KTIPAYAPGDTVIVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKVSNGEGVERTFQVYSPLIAKIEVKRRGDVRRAKLYYLRSR 105
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_NITEC (50S ribosomal protein L19 OS=Nitrosomonas eutropha (strain C91) GN=rplS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14 Identity = 40/106 (37.74%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 ++++ L++E +E + + IPD PG + + V V+ +++R +G+VIA+RN G++++F +R++ +G VE F YSP I ++V + VRRAKLYYLRD+ Sbjct: 2 NLIEQLEREEIERLG--KIIPDFSPGDTLVVNVNVVEGDRKRTQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQTYSPLIASMEVKRRGAVRRAKLYYLRDR 105 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |