CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_RHILO (50S ribosomal protein L19 OS=Rhizobium loti GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 41/105 (39.05%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 I++ L+ E ++++R++P+ +PG V+++V + E R RV +G+VIAR +G F +R++ G GVE +FP++SP + ++++ + KVRRAKLYYLRD+ Sbjct: 3 IIRQLEAEQAAKIEAKRKLPEFQPGDTVRVQVRVTEGTRTRVQAYEGVVIARAGSGFQENFTVRKISYGEGVERVFPVFSPMVEGVEIVRRGKVRRAKLYYLRDR 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_GEOSF (50S ribosomal protein L19 OS=Geobacter sp. (strain FRC-32) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +A+E + ++ IP +PG V+++V I E +K R+ +G+VI R+N GI +F +R++ GVGVE FPL+SP+I I+V+ + +VRRAKLYYLR Sbjct: 5 DAIEMEQMKKNIPGFRPGDTVKVQVKIVEGDKSRIQAFQGVVIGRQNGGIRESFTVRKISNGVGVERSFPLHSPSIDAIEVITRGQVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_DESRM (50S ribosomal protein L19 OS=Desulfotomaculum reducens (strain MI-1) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 42/96 (43.75%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +++E + ++E+P +PG +++ VI N+ R+ +G+VI RR G+S TF +RR+ GVGVE FPL++P I I+V+ + KVRRA+LYYLR Sbjct: 5 QSLEQEQIKKELPSFRPGDTIKVNYKVIEGNRERIQAFEGVVIRRRGGGLSETFTVRRISYGVGVERTFPLHAPKIDSIEVVRRGKVRRARLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CORDI (50S ribosomal protein L19 OS=Corynebacterium diphtheriae GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 690 M +LDK V+ + +IP +PG + + V VI +K R+ KG+VI R+ AG+ TF +R++ G+GVE FP+++PNI +I+V+ + VRRAKLYYLRD Sbjct: 1 MNLLDK--VDAASLRDDIPAFRPGDTLNVHVKVIEGSKSRIQVFKGVVIRRQGAGVRETFTIRKVSFGIGVERTFPVHTPNIDKIEVVTRGDVRRAKLYYLRD 101
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUSU (50S ribosomal protein L19 OS=Brucella suis GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUSI (50S ribosomal protein L19 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUO2 (50S ribosomal protein L19 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUME (50S ribosomal protein L19 OS=Brucella melitensis GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUMB (50S ribosomal protein L19 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_BRUC2 (50S ribosomal protein L19 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplS PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.137e-16 Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 I++ L+ E ++ +R++PD +PG V+++V + E R RV +G+ IAR AG++ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLR Sbjct: 4 IIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVEVVRRGKVRRAKLYYLR 106 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |