CF831998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CAUSK (50S ribosomal protein L19 OS=Caulobacter sp. (strain K31) GN=rplS PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.485e-16 Identity = 46/108 (42.59%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 373 ARHIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 A +I++ L++E + + + R IP+ +PG +++ V I E +R RV +G+ IAR G+ +F +R++ G GVE LFPL SP+I I+V + VRRAKLYYLRD+ Sbjct: 2 AANIIKELEREEAQRLLAARAIPEFEPGDTLRVNVRIKEGERERVQAYEGVCIARSGGGVHESFTVRKISFGEGVERLFPLLSPSIESIEVKRRGVVRRAKLYYLRDR 109
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_RALME (50S ribosomal protein L19 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 44/106 (41.51%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I++ ++KE + + + + IP PG V + V V+ N++RV +G+VIA+RN G++++F +R++ +G GVE F LYSP I I+V + VRRAKLYYLR++ Sbjct: 2 NIIEQIEKEEIARLTANKTIPAFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQLYSPLIAGIEVKRRGDVRRAKLYYLRER 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_RALEJ (50S ribosomal protein L19 OS=Ralstonia eutropha (strain JMP134) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 44/106 (41.51%), Postives = 72/106 (67.92%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I++ ++KE + + + + IP PG V + V V+ N++RV +G+VIA+RN G++++F +R++ +G GVE F LYSP I I+V + VRRAKLYYLR++ Sbjct: 2 NIIEQIEKEEIARLTANKTIPAFAPGDTVIVNVNVVEGNRKRVQAYEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQLYSPLIAGIEVKRRGDVRRAKLYYLRER 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_RALEH (50S ribosomal protein L19 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 44/106 (41.51%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I++ ++KE + + + + IP PG V + V V+ N++RV +G+VIA+RN G++++F +R++ +G GVE F LYSP I I+V + VRRAKLYYLR + Sbjct: 2 NIIEQIEKEEIARLTANKTIPAFAPGDTVVVSVNVVEGNRKRVQAYEGVVIAKRNRGLNSSFIVRKISSGEGVERTFQLYSPLIAAIEVKRRGDVRRAKLYYLRQR 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_METSB (50S ribosomal protein L19 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 45/106 (42.45%), Postives = 69/106 (65.09%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I+ L+ E + + + IP+ +PG V + V + E +R RV +G+ IAR G++ +F +R++ G GVE +F +YSPNI IKV+ + KVRRAKLYYLRD+ Sbjct: 2 NIIAELEAEQAAKLLAGKTIPEFQPGDTVIVNVKVKEGERTRVQAYEGVCIARNGGGLNESFTVRKISYGEGVERVFAIYSPNIDSIKVVRRGKVRRAKLYYLRDR 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_GLUOX (50S ribosomal protein L19 OS=Gluconobacter oxydans GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 44/106 (41.51%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 379 HIMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 +I+Q + +E + R +P+ G V++ V + E R RV + +G+VIAR N G+++ F +R++ G GVE +FPLY+P+I I+V+ + KVRRAKLYYLR + Sbjct: 2 NIIQQYEAREIERLSGVRAVPEFIAGDTVRVGVRVVEGTRERVQSFEGVVIARSNKGLNSNFTVRKISNGEGVERVFPLYAPSIASIEVVRRGKVRRAKLYYLRGR 107
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_GEOMG (50S ribosomal protein L19 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 385 MQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 M +D +E +K + IP KPG V++ V I E +K R+ +G+VIAR+N GI +F +R++ G+GVE +FPL+SP++ I+V+ + VRRAKLYYLR Sbjct: 1 MNTIDMLELEQMK--KNIPPFKPGDTVKVHVKIVEGDKSRIQAFQGVVIARQNGGIRESFTVRKISNGIGVERVFPLHSPSLDAIEVITRGHVRRAKLYYLR 100
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_DICTD (50S ribosomal protein L19 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 46/105 (43.81%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 I+Q L+KE ++ ++IP+I PG V++ I E +K R+ +G+VIA+++ GI T +R++V GVGVE +FPL+SP + +I+V+ + +VRRAKLYYLR++ Sbjct: 4 IIQNLEKEYMK-----KDIPEIWPGDTVRVHYRIVEGDKERIQVYEGVVIAKKHGGIRETITVRKVVQGVGVERIFPLHSPLVEKIEVVRRGRVRRAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_DICT6 (50S ribosomal protein L19 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 46/105 (43.81%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 382 IMQILDKEAVENVKSQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 693 I+Q L+KE ++ ++IP+I PG V++ I E +K R+ +G+VIA+++ GI T +R++V GVGVE +FPL+SP + +I+V+ + +VRRAKLYYLR++ Sbjct: 4 IIQNLEKEYMK-----KDIPEIWPGDTVRVHYRIVEGDKERIQVYEGVVIAKKHGGIRETITVRKVVQGVGVERIFPLHSPLVEKIEVVRRGRVRRAKLYYLRER 103
BLAST of CF831998 vs. ExPASy Swiss-Prot
Match: RL19_CARHZ (50S ribosomal protein L19 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplS PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 41/96 (42.71%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 403 EAVENVKSQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 687 +++E + ++++P+ +PG V++ VI N+ R+ +G+VI +R +G+S TF +RR+ G+GVE FPL+SP I +I+V+ + KVRRA+LYYLR Sbjct: 5 KSLEEEQLRKDLPEFRPGDTVKVYFKVIEGNRERIQPYEGVVIRKRGSGLSATFTVRRVSYGIGVERTFPLHSPRIEKIEVIRRGKVRRARLYYLR 100 The following BLAST results are available for this feature:
BLAST of CF831998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831998 ID=CF831998; Name=CF831998; organism=Citrus sinensis; type=EST; length=741bpback to top |