CF832019
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS172_ARATH (40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2 SV=3) HSP 1 Score: 226.483 bits (576), Expect = 1.106e-58 Identity = 115/128 (89.84%), Postives = 120/128 (93.75%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITP 453 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLM RI KGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD SG+ VEPQ + P Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAVEPQQAMAP 128
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS173_ARATH (40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2 SV=3) HSP 1 Score: 224.942 bits (572), Expect = 3.218e-58 Identity = 113/131 (86.26%), Postives = 122/131 (93.13%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITPPVF 462 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLM RI KGPVRGISLKLQEEERERRMDFVPDESAIK D++KVDKETL+MLA+LGMSDI+G+ +VE Q + P VF Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAPAVF 131
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS174_ARATH (40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2 SV=3) HSP 1 Score: 224.557 bits (571), Expect = 4.203e-58 Identity = 114/128 (89.06%), Postives = 119/128 (92.97%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITP 453 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLM RI KGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ VEPQ + P Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAVEPQQAMAP 128
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS171_ARATH (40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 9.363e-58 Identity = 115/132 (87.12%), Postives = 121/132 (91.67%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITP-PVF 462 MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLM RI KGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ V+PQ + P P F Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAVDPQQAMAPIPAF 132
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_SOLLC (40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 3.012e-56 Identity = 113/133 (84.96%), Postives = 122/133 (91.73%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVE--VEPQSMITPPVF 462 MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLM RI KGPVRGISLKLQEEERERRMDFVPDESAIKTD I+VDKETLDML+ALGMSD+ G+V+ EPQ++ P + Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQAAEPQAVAALPSY 133
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_THEPA (40S ribosomal protein S17 OS=Theileria parva GN=RPS17 PE=3 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38 Identity = 74/112 (66.07%), Postives = 96/112 (85.71%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 405 MGRVRTKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM RI KGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_THEAN (40S ribosomal protein S17 OS=Theileria annulata GN=RPS17 PE=2 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38 Identity = 74/112 (66.07%), Postives = 96/112 (85.71%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 405 MGRVRTKTVK+++RQ++E+YY ++ LDF NKK+ EEVA+IPSKR+RNK+AGF THLM RI KGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17B_SCHPO (40S ribosomal protein S17-B OS=Schizosaccharomyces pombe GN=rps17b PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38 Identity = 78/118 (66.10%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLV 423 MGRVRTKT K++SR VIE+YY R+TLDF TNK+I++EVAII SKRLRNKIAG++THLM RI +GPVRGIS KLQEEERER+ +VP+ S ++ D+I VD++T DML ALG I +V Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGYDSIPTVV 118
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37 Identity = 75/122 (61.48%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 435 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLM RI +GPVRGIS+KLQEEERERR ++VP+ SA+ + I+VD +T +ML L +S L +P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
BLAST of CF832019 vs. ExPASy Swiss-Prot
Match: RS17_PIG (40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.836e-37 Identity = 75/122 (61.48%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 70 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMNRIHKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 435 MGRVRTKTVKK++R +IE+YY+R+ DFHTNK++ EE+AIIPSK+LRNKIAG+ THLM RI +GPVRGIS+KLQEEERERR ++VP+ SA+ + I+VD +T +ML L +S L +P Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122 The following BLAST results are available for this feature:
BLAST of CF832019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832019 ID=CF832019; Name=CF832019; organism=Citrus sinensis; type=EST; length=705bpback to top |