CF832236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA2_PARAR (60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.795e-19 Identity = 45/62 (72.58%), Postives = 57/62 (91.94%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKL 201 MKV+AA+ LA+LGGNTSP+ +D+K IL SVGAD +D+++ELLLS+VKGKDITELIASGRE+L Sbjct: 1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERL 62
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA2B_MAIZE (60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.018e-18 Identity = 52/113 (46.02%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 354 MKV+AAY LAVLGGNTSP+ADD+K IL SVGA+ ++ +LE LL+E+K KDITE+IA+GRE+L D+DMGFSLFD Sbjct: 1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPSGGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA22_ARATH (60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.277e-17 Identity = 45/62 (72.58%), Postives = 53/62 (85.48%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKL 201 MKVVAAY LAVL G SP++ DIK ILGSVGA+ ED+++ELLL EVKGKD+ ELIA+GREKL Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA24_ARATH (60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.529e-17 Identity = 44/62 (70.97%), Postives = 51/62 (82.26%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKL 201 MKV AA+ LAVLGGN +PSAD+IK I+G+VGAD + +ELLL EV GKDI ELIASGREKL Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGREKL 62
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA21_ARATH (60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 9.529e-17 Identity = 44/62 (70.97%), Postives = 52/62 (83.87%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKL 201 MKVVAA+ LAVL G SP+ DIK ILGSVGA+ ED+++ELLL EVKGKD+ ELIA+GREKL Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKL 62
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA2A_MAIZE (60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15 Identity = 51/113 (45.13%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 354 MK VAAY LAVL GN SPSADD+ IL SVG + ++ ++ELLLS++ GKDITELIA+GREK DDDMGFSLFD Sbjct: 1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKF-ASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 112
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA2_BRAFL (60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKL 201 M+ VAAY LAVLGGN +PSA DIK ILGSVG D ED RL ++ E+KGKDI E++A+GR KL Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKL 62
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA2_ALTAL (60S acidic ribosomal protein P2 OS=Alternaria alternata GN=ALTA5 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.987e-14 Identity = 47/113 (41.59%), Postives = 58/113 (51.33%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 354 MK +AAY L LGGNTSPSA D+K +L SVG + + +RL+ L+SE++GKDI ELIASG EKL D+DMGF LFD Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGGAGGAAASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA2_FUSCU (60S acidic ribosomal protein P2 OS=Fusarium culmorum PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.869e-13 Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKL 201 MK +AAY L LGGNTSPSA D+K +L SVG D +++RL L+SE++GKDI +LIA G EKL Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSEKL 62
BLAST of CF832236 vs. ExPASy Swiss-Prot
Match: RLA2_CLAHE (60S acidic ribosomal protein P2 OS=Cladosporium herbarum GN=CLAH5 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.090e-12 Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 1 Query: 16 MKVVAAYPLAVLGGNTSPSADDIKGILGSVGADCEDNRLELLLSEVKGKDITELIASGREKL 201 MK +AA+ L L GN+SPSA+DIK +L SVG D ++ RL LL E++GKDI ELI+SG EKL Sbjct: 1 MKYLAAFLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSEKL 62 The following BLAST results are available for this feature:
BLAST of CF832236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832236 ID=CF832236; Name=CF832236; organism=Citrus sinensis; type=EST; length=672bpback to top |