CF832481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN1_CAEEL (GPN-loop GTPase 1 homolog OS=Caenorhabditis elegans GN=gop-2 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.085e-20 Identity = 56/173 (32.37%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLV 653 LV+G AGSGK+T+ L + +++NLDPA YPV +DIR+ + ++VM+E G+GPNG ++ C+ + D + D PGQIE FT D L S + V +Y++DS T+ T F+S + + S + + +LP + + +K D+V Sbjct: 34 LVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKYKEVMKEFGMGPNGAIMTCLNLMCTRFDKVIELINKRSSDFSVCLLDTPGQIEAFTWSASGSIITDSLASSHPTV-VMYIVDSARATNPTTFMSNMLYACSILYRTKLPFIVVFNKADIV 205
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN1_HUMAN (GPN-loop GTPase 1 OS=Homo sapiens GN=GPN1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.416e-20 Identity = 57/208 (27.40%), Postives = 103/208 (49.52%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTNKKEIE---------DYLNPESQFLLSELNQHMA 731 LV+G AGSGK+T+ L H +++NLDPA +P +DIR+ + ++VM++ GLGPNGG++ + D + D PGQIE+FT + + +F +Y++D+ T+ F+S + + S + + +LP + +++K D++ + +E D LN E+ + +S L + M+ Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTW-SASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTY-VSNLTRSMS 228
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN1_MOUSE (GPN-loop GTPase 1 OS=Mus musculus GN=Gpn1 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.416e-20 Identity = 57/208 (27.40%), Postives = 103/208 (49.52%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTNKKEIE---------DYLNPESQFLLSELNQHMA 731 LV+G AGSGK+T+ L H +++NLDPA +P +DIR+ + ++VM++ GLGPNGG++ + D + D PGQIE+FT + + +F +Y++D+ T+ F+S + + S + + +LP + +++K D++ + +E D LN E+ + +S L + M+ Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNTFRYVLIDTPGQIEVFTW-SASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTY-VSNLTRSMS 228
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN1_DICDI (GPN-loop GTPase 1 homolog OS=Dictyostelium discoideum GN=xab1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.030e-20 Identity = 61/216 (28.24%), Postives = 106/216 (49.07%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTNKKEIEDYLNPESQFLLSELNQHMAPQFAKLNKSLIELVDEY 782 +V+G AGSGK+T + H + +I+NLDPA Y +DIR+ ++ ++VM++ LGPNGG++ + D + D PGQIE+FT + L + +F VY++D+ D T F+S + + S M + +LP V +K+D +TN + E++++ F + N L +SL +++E+ Sbjct: 38 IVLGMAGSGKTTLLQRIRAHLYENKIPGYIINLDPAVSKLPYTPNIDIRDTVNYKEVMKQFNLGPNGGIVTSLNLFSTKFDKVLEIVEKRSSSLDYIILDTPGQIEVFTW-SASGTIITELMASSFPTVLVYVVDTPRTVDPTTFMSNMLYACSIMYKSKLPMVVAFNKID-ITNHRFAEEWMSDFDSFQDALTND--PTYMGNLTRSLSLVLEEF 249
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN1_BOVIN (GPN-loop GTPase 1 OS=Bos taurus GN=GPN1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.181e-20 Identity = 56/208 (26.92%), Postives = 104/208 (50.00%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTNKKEIE---------DYLNPESQFLLSELNQHMA 731 LV+G AGSGK+T+ L + + +++NLDPA +P +DIR+ + ++VM++ GLGPNGG++ + D + D PGQIE+FT + + +F +Y++D+ T+ F+S + + S + + +LP + +++K D++ + +E D LN E+ + +S L + M+ Sbjct: 23 LVLGMAGSGKTTFVQRLTGYLHSQGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTW-SASGTIITEALASSFPTIVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTY-VSNLTRSMS 228
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: NPA3_SCHPO (GTPase npa3 OS=Schizosaccharomyces pombe GN=npa3 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.261e-18 Identity = 52/174 (29.89%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 129 AQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDL 650 A +V+G AGSGK+T+ L H + + +I+NLDPA N Y +DIR+ I+ ++VM++ LGPNGG++ + D + D PGQIE+F D L S ++ C Y++D+ T + ++S + + S + + +LP + + +K D+ Sbjct: 10 AIIVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIRDTINYKEVMKQYNLGPNGGIMTSLNLFVTKFDQVLKILEKRAPTVDHILIDTPGQIEIFQWSASGSIICDTLAS-SWPTCIAYVVDTPRATSTSTWMSSMLYACSMLYKAKLPLIIVYNKCDV 182
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: NPA3_YEAST (GTPase NPA3 OS=Saccharomyces cerevisiae GN=NPA3 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.809e-15 Identity = 48/172 (27.91%), Postives = 79/172 (45.93%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDL 650 + IG AGSGK+T+ L H + +++NLDPA Y +DIR+ I + VME LGPNG ++ + +D + D PGQIE F + S +F Y++D+ + T F+S + + S + + +LP + + +K D+ Sbjct: 7 ICIGMAGSGKTTFMQRLNSHLRAEKTPPYVINLDPAVLRVPYGANIDIRDSIKYKKVMENYQLGPNGAIVTSLNLFSTKIDQVIRLVEQKKDKFQNCIIDTPGQIECFVWSASGAIITESFAS-SFPTVIAYIVDTPRNSSPTTFMSNMLYACSILYKTKLPMIVVFNKTDV 177 The following BLAST results are available for this feature:
BLAST of CF832481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832481 ID=CF832481; Name=CF832481; organism=Citrus sinensis; type=EST; length=930bpback to top |