CF832481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_USTMA (GPN-loop GTPase 3 homolog UM01243 OS=Ustilago maydis GN=UM01243 PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.906e-74 Identity = 138/267 (51.69%), Postives = 189/267 (70.79%), Query Frame = 3 Query: 126 YAQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSR-NFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVT-----------NKKEIEDYLNPESQFLLSELNQHMAPQFAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 YA LV GPAGSGKST+CS+L H +++ R +H+ NLDPAAE F+Y ++DI+ELISLEDVMEE+ LGPNGGLIYC E+L DNL DW + DCPGQIEL+TH P++ V+ L S+ +F +CA YLL+SQFI D TK+ +G ++++SAM+ LE+PH+N+LSKMDLV K+E+E YL+P+ L+ E+N P+F LN++L++L+D++SMVSFMPLD E S+ +LS IDN +Q+GED + K Sbjct: 4 YAVLVSGPAGSGKSTFCSALIAHAQSLGRNVHLFNLDPAAERFEYQPSIDIKELISLEDVMEEMNLGPNGGLIYCFEYLLDNL-DW-LDDELGQFNDDYIIIDCPGQIELYTHFPIMSRLVNILSSQYHFRICATYLLESQFIDDKTKYFAGVLSAMSAMINLEVPHINLLSKMDLVEKGEIGSEAKRGRKREMERYLDPDPLLLMDEVNSRTNPKFHSLNQALVQLIDDFSMVSFMPLDSTDEDSVGTILSHIDNAVQYGEDEEPK 268
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_DICDI (GPN-loop GTPase 3 homolog OS=Dictyostelium discoideum GN=gpn3 PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 1.143e-70 Identity = 126/258 (48.84%), Postives = 191/258 (74.03%), Query Frame = 3 Query: 126 YAQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTNK---KEIEDYLNPESQFLLSELNQHMAPQFAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 + QLV+GPAGSGKSTYC ++ ++CE ++R++HIVNLDPAAE F+YPV++DI+ L+++++VM+EL GPNGGL+Y ME+L +N+ DW + DCPGQIEL++H+PV+R VDHL+ ++VC+V+L+DSQFI D KFISG + LSAMV+LE+PH+N+L+K+D++ KEIE +L+ E Q L+ ELN ++ ++NK++ L++++S+V F+PLD+ + S+ +L IDN IQ+GED + K Sbjct: 4 HVQLVMGPAGSGKSTYCDTMRKYCEEIKRSVHIVNLDPAAEVFEYPVSVDIKNLVTVDEVMDELHYGPNGGLVYAMEYLIENM-DW-LTDELGDYEDDYLIIDCPGQIELYSHIPVMRILVDHLQQIGYSVCSVFLVDSQFILDNCKFISGALMCLSAMVRLEVPHINVLTKIDVLKTSDQYKEIEKFLDLEVQNLVEELNLETHDRYHRMNKAIGSLLEDFSLVGFVPLDITDQESLNVLLQHIDNSIQYGEDLEPK 259
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_DANRE (GPN-loop GTPase 3 OS=Danio rerio GN=gpn3 PE=2 SV=2) HSP 1 Score: 266.929 bits (681), Expect = 1.143e-70 Identity = 134/260 (51.54%), Postives = 186/260 (71.54%), Query Frame = 3 Query: 126 YAQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEE--LGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVT--NKKEIEDYLNPESQFLLSELNQHM-APQFAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 YAQLV+GPAGSGKSTYC+++ HC+ + R++ +VNLDPAAE+F+YPV DIRELI ++DVME+ L GPNGGLI+CME+ +N D W +FDCPGQIEL+TH+PV++ V+ L+ F VC V+L+DSQF+ + KFISG MA+LSAMV LE+P VNI++KMDL++ KKEIE YL+P+ ++ + + + + +F+KL K++ L+D+YSMV F+P D E I VL ID IQ+GED ++K Sbjct: 4 YAQLVMGPAGSGKSTYCATMLEHCQALNRSVQVVNLDPAAEHFEYPVIADIRELIQVDDVMEDDSLRFGPNGGLIFCMEYFSNNFD-WLEESLGHVEDDYI-LFDCPGQIELYTHLPVMKQLVEQLQQWEFRVCGVFLVDSQFMVETFKFISGVMAALSAMVMLEIPQVNIMTKMDLLSPKAKKEIEKYLDPDMYSMMEDNSVALRSKKFSKLTKAICGLIDDYSMVRFLPFDRTDEEGINIVLQHIDFSIQYGEDLEVK 261
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_XENLA (GPN-loop GTPase 3 OS=Xenopus laevis GN=gpn3 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.949e-70 Identity = 134/260 (51.54%), Postives = 185/260 (71.15%), Query Frame = 3 Query: 126 YAQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEE--LGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN--KKEIEDYLNPESQFLLSEL-NQHMAPQFAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 YAQLV+GPAGSGKSTYCS++ +HCET+ R++ +VNLDPAAE+FDYPV DIRELI ++DVME+ L GPNGGL+YCME+ +N DW +FDCPGQIEL+TH+PV++ V+ L+ F VC V+L+DSQF+ + KF+SG +A+LSAMV LE+P NI++KMDL++ KKEIE +L+P+ ++ + ++ + +F KL ++L LVD+YSMV F+P D E + VL ID IQ+GED + K Sbjct: 4 YAQLVMGPAGSGKSTYCSTMVQHCETLNRSVQVVNLDPAAEHFDYPVLADIRELIEVDDVMEDRSLRFGPNGGLVYCMEYFANNF-DW-LESCLGHTEDDYILFDCPGQIELYTHLPVMKYLVEQLQQWEFRVCGVFLVDSQFMVESFKFLSGVLAALSAMVSLEIPQCNIMTKMDLLSKKAKKEIEKFLDPDMYSMIEDTPSRFKSTKFKKLTEALCGLVDDYSMVRFLPFDRSDEECMNIVLQHIDFAIQYGEDLEFK 261
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_MOUSE (GPN-loop GTPase 3 OS=Mus musculus GN=Gpn3 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.949e-70 Identity = 136/260 (52.31%), Postives = 183/260 (70.38%), Query Frame = 3 Query: 126 YAQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEE--LGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN--KKEIEDYLNPESQFLLSELNQHMAPQ-FAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 YAQLV+GPAGSGKSTYCS++ +HCE + R++ +VNLDPAAE+F+YPV DIRELI ++DVME+ L GPNGGL++CME+ +N D W +FDCPGQIEL+TH+PV++ V L+ F VC V+L+DSQF+ + KFISG +A+LSAMV LE+P VNI++KMDL++ KKEIE +L+P+ L+ + + Q F KL K++ LVD+YSMV F+P D E S+ VL ID IQ+GED + K Sbjct: 4 YAQLVMGPAGSGKSTYCSTMVQHCEALNRSVQVVNLDPAAEHFNYPVMADIRELIEVDDVMEDESLRFGPNGGLVFCMEYFANNFD-WLENCLGHVEDDYI-LFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMVSLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYSLIDDSTGDLRSQKFKKLTKAVCGLVDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYGEDLEFK 261
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_RAT (GPN-loop GTPase 3 OS=Rattus norvegicus GN=Gpn3 PE=2 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.546e-70 Identity = 136/260 (52.31%), Postives = 182/260 (70.00%), Query Frame = 3 Query: 126 YAQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEE--LGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN--KKEIEDYLNPESQFLLSELNQHMAPQ-FAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 YAQLV+GPAGSGKSTYCS++ +HCE + R++ +VNLDPAAE+F+YPV DIRELI ++DVME+ L GPNGGL++CME+ +N D W +FDCPGQIEL+TH+PV++ V L+ F VC V+L+DSQF+ + KFISG +A+LSAM+ LE+P VNI++KMDL++ KKEIE +L+P+ LL + + Q F KL K + LVD+YSMV F+P D E S+ VL ID IQ+GED + K Sbjct: 4 YAQLVMGPAGSGKSTYCSTMVQHCEALNRSVQVVNLDPAAEHFNYPVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFD-WLENCLGHVEDDYI-LFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYSLLEDSTGDLRSQKFKKLTKPVCGLVDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYGEDLEFK 261
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_KLULA (GPN-loop GTPase 3 homolog KLLA0D18557g OS=Kluyveromyces lactis GN=KLLA0D18557g PE=3 SV=2) HSP 1 Score: 265.774 bits (678), Expect = 2.546e-70 Identity = 130/256 (50.78%), Postives = 181/256 (70.70%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSR-NFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVT---NKKEIEDYLNPESQFLLSELNQHMAPQFAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 LV+GPAG+GKST+C+++ H +++ R HIVNLDPAAE Y +DIR+LISLEDVMEE GLGPNG LIYC E+L +NL DW +FDCPGQIEL+TH+PVL V HL+++ NFN+CA YLL++ F+ D +KF SG ++++SAM+ LELPH+NILSK+DLV NKK ++ +LNP+ L ++N+ P+F KLN+++ LVD++ MV F+PL+ + S+ +LS ID+ QW E + K Sbjct: 7 LVLGPAGAGKSTFCNAIISHMQSIGRRAHIVNLDPAAEATKYEFTIDIRDLISLEDVMEEFGLGPNGSLIYCFEYLLNNL-DW-LDEEIGDYNDEYLIFDCPGQIELYTHIPVLPTIVRHLQNQLNFNLCATYLLEAPFVIDTSKFFSGALSAMSAMILLELPHINILSKLDLVKDSHNKKALKKFLNPDPLLLTDKVNEETNPKFHKLNEAIANLVDDFGMVQFLPLEAKNPESVSTILSYIDDVTQWAEAQEPK 260
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_CANGA (GPN-loop GTPase 3 homolog CAGL0G08294g OS=Candida glabrata GN=CAGL0G08294g PE=3 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.263e-69 Identity = 127/256 (49.61%), Postives = 181/256 (70.70%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSR-NFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN---KKEIEDYLNPESQFLLSELNQHMAPQFAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 LV+GPAG+GKST+C+S+ H +T+ R HIVNLDPAAE Y +DIR+LISL+DVMEEL LGPNG LIYC E+L NL DW +FDCPGQIEL+TH+PVL N V HL+ + NFN+CA YLL++ F+ D +KF SG ++++SAM+ LELPH+N+LSK+D++ + KK+++ +LNP++ L +E +Q++ P+F LN+ + LVD++ MV F+PL+ S+ +LS +D+ QW E + K Sbjct: 7 LVLGPAGAGKSTFCNSIISHMQTIGRRAHIVNLDPAAEPSKYEFTIDIRDLISLDDVMEELDLGPNGALIYCFEYLMKNL-DW-LDEEIGDYNDEYLIFDCPGQIELYTHIPVLPNIVRHLQGQLNFNLCATYLLEAPFVIDSSKFFSGALSAMSAMILLELPHINVLSKLDMIKDEYGKKKLKRFLNPDAMLLANEADQNLNPKFHHLNQCIANLVDDFGMVQFLPLEANNPESVATILSYVDDVTQWAEAQEQK 260
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_DEBHA (GPN-loop GTPase 3 homolog DEHA2G13222g OS=Debaryomyces hansenii GN=DEHA2G13222g PE=3 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 2.155e-69 Identity = 133/257 (51.75%), Postives = 180/257 (70.04%), Query Frame = 3 Query: 135 LVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEELGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLK-SRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN---KKEIEDYLNPESQFLLSELNQHMAPQFAKLNKSLIELVDEYSMVSFMPLDLRKES-SIRYVLSQIDNCIQWGEDADLK 890 L +GPAG GKST+C+S+ H +++ R HIVNLDPAAE +Y +DIR+LISL+DVMEE+ LGPNG LIYC E L +NL DW +FDCPGQIEL+TH+PVL V HL+ S NFN+CA YLL++ F+ D +KF SG ++++SAM+ LELPH+NILSK+DL+ N KKE++ +LNP+ L + + P+FAKLNK++ LVD++ MV F+PLD K+S S+ +LS ID+ QW E + K Sbjct: 7 LALGPAGVGKSTFCNSIITHMQSIGRRAHIVNLDPAAEPSEYEFTIDIRDLISLQDVMEEMDLGPNGALIYCFEFLMNNL-DW-LDEEIGDFNDEYLIFDCPGQIELYTHIPVLPTIVRHLQTSLNFNLCATYLLEAPFVIDRSKFFSGALSAMSAMILLELPHINILSKIDLIKNEVSKKELKKFLNPDPLLLNASSDNESNPKFAKLNKAIANLVDDFGMVQFLPLDCNKDSDSVATILSYIDDVTQWSESQEPK 261
BLAST of CF832481 vs. ExPASy Swiss-Prot
Match: GPN3_HUMAN (GPN-loop GTPase 3 OS=Homo sapiens GN=GPN3 PE=1 SV=2) HSP 1 Score: 262.307 bits (669), Expect = 2.815e-69 Identity = 132/260 (50.77%), Postives = 183/260 (70.38%), Query Frame = 3 Query: 126 YAQLVIGPAGSGKSTYCSSLYRHCETVRRTMHIVNLDPAAENFDYPVAMDIRELISLEDVMEE--LGLGPNGGLIYCMEHLEDNLDDWXXXXXXXXXXXXXXVFDCPGQIELFTHVPVLRNFVDHLKSRNFNVCAVYLLDSQFITDVTKFISGCMASLSAMVQLELPHVNILSKMDLVTN--KKEIEDYLNPESQFLLSELNQHM-APQFAKLNKSLIELVDEYSMVSFMPLDLRKESSIRYVLSQIDNCIQWGEDADLK 890 YAQLV+GPAGSGKSTYC+++ +HCE + R++ +VNLDPAAE+F+Y V DIRELI ++DVME+ L GPNGGL++CME+ +N D W +FDCPGQIEL+TH+PV++ V L+ F VC V+L+DSQF+ + KFISG +A+LSAM+ LE+P VNI++KMDL++ KKEIE +L+P+ LL + + + +F KL K++ L+D+YSMV F+P D E S+ VL ID IQ+GED + K Sbjct: 4 YAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFD-WLENCLGHVEDDYI-LFDCPGQIELYTHLPVMKQLVQQLEQWEFRVCGVFLVDSQFMVESFKFISGILAALSAMISLEIPQVNIMTKMDLLSKKAKKEIEKFLDPDMYSLLEDSTSDLRSKKFKKLTKAICGLIDDYSMVRFLPYDQSDEESMNIVLQHIDFAIQYGEDLEFK 261 The following BLAST results are available for this feature:
BLAST of CF832481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832481 ID=CF832481; Name=CF832481; organism=Citrus sinensis; type=EST; length=930bpback to top |