CF834419

Overview
NameCF834419
Unique NameCF834419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834419 vs. ExPASy Swiss-Prot
Match: Y286_HAEIN (Uncharacterized aminotransferase HI0286 OS=Haemophilus influenzae GN=HI0286 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.447e-17
Identity = 59/208 (28.37%), Postives = 103/208 (49.52%), Query Frame = 1 
Query:  178 NENVKKVQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQRPLTFPRQVVALCQAPFLLDDPNVGIVFPADAIARAKHYLSLTSGGLGAYSDSRGIPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQTLNCVIRGEGDGVLVPVPQYPLYSATISLLGGSLVPYYLEETANWGLDLNDLQQSVAQARSKGITVRAMVIINP 801
            ++ ++ V Y +RG ++  A  L++EG KI+  N+GNP                   APF       G   P + +      L    G    Y DS+G+   RK + ++ + +    +    +++ +G S+ +   +  ++  +GD VLVP+P YPL++A ++L GG  V Y  +E ANW   ++D++  V  A++K     A+VIINP
Sbjct:    7 SDKLEHVCYDIRGPVHKEALRLEEEGNKILKLNIGNP-------------------APF-------GFEAPDEILVDVLRNLPSAQG----YCDSKGLYSARKAIVQYYQSKGILGATVNDVYIGNGVSELITMAMQALLN-DGDEVLVPMPDYPLWTAAVTLSGGKAVHYLCDEDANWFPTIDDIKAKV-NAKTK-----AIVIINP 177
The following BLAST results are available for this feature:
BLAST of CF834419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
Y286_HAEIN4.447e-1728.37Uncharacterized aminotransferase HI0286 OS=Haemoph... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05H24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05H24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834419 ID=CF834419; Name=CF834419; organism=Citrus sinensis; type=EST; length=803bp
CCTTTTGATCAAATCCTAATATCAGCTTAGCAGGCGCTTGCATTTTTCTG
TGCACGTCAGTGTAATTGTAAACATTCAATTGGCTCGAGCCGAAGTTAGC
CCACAAGCACTCTCTCAGTTAAGATCCCAGGCGTTTAGTACATCATGGCA
CCAAAGGCATTGGACTATGAGTCTATGAATGAAAACGTGAAGAAGGTTCA
ATATGCTGTTAGAGGAGAGTTGTATCTTCGAGCTTCTGAGCTTCAGAAGG
AAGGGAAGAAGATTATTTTTACAAATGTTGGCAACCCTCATGCTCTAGGA
CAGAGGCCATTGACCTTCCCTCGGCAGGTGGTTGCTCTTTGCCAGGCTCC
ATTTTTGCTAGATGATCCTAATGTAGGAATTGTCTTCCCTGCTGATGCAA
TTGCAAGAGCTAAACATTATCTTTCCCTGACTTCAGGGGGTCTAGGTGCT
TACAGTGACTCCAGAGGTATTCCAGGTGTAAGGAAGGAAGTAGCAGAGTT
CATTGAAAGGCGCGATGGTTATCCAAGTGACCCAGAACTCATATTTCTCA
CTGATGGTGCCAGCAAAGGAGTTATGCAGACTTTAAATTGTGTCATCCGT
GGTGAAGGGGATGGGGTTTTGGTTCCAGTTCCACAGTACCCACTGTACTC
AGCTACCATATCTCTTTTAGGTGGTTCTCTTGTTCCATACTACTTGGAAG
AGACAGCAAATTGGGGTCTTGATCTTAATGACCTTCAGCAGTCAGTTGCA
CAGGCTCGTTCTAAAGGAATTACGGTTAGAGCAATGGTGATTATTAATCC
TGG
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