CF835137

Overview
NameCF835137
Unique NameCF835137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:316..1010. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16
Identity = 63/227 (27.75%), Postives = 104/227 (45.81%), Query Frame = 2
Query:   38 LTAYCPLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDR--MVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNPNEREFKDT--VSGILEEA----GKPNLSDHFP 694
            ++  C  + T V +  +    +     LPP P   PVIGNL ++G  PH+S  +LA+  G +M L LG V   V+SS   A+ +L+ HDL  C R  +V   ++S  F    F+    P    WK  R+     +F S+KL +   ++  +   L+  + ++      +D+ +  F  + ++L    F       +E EF DT  +  ++ E     G    SD FP
Sbjct:    3 ISLLCLFLITFVSLTIVGCKIKRSIWNLPPSPPKLPVIGNLHQVGELPHRSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFT----PYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKLSESAVDQSPVDLSKTLFWLAASILFRVAFGQSF---HESEFTDTDKIDELVFETETAQGSFTCSDFFP 222          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 47/152 (30.92%), Postives = 85/152 (55.92%), Query Frame = 2
Query:   59 VFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLEL-GAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 511
            + TL  ++AL        K+ PPGP   P++G LL L  + P  +L +LA  +GP+M LR+GQ+ TVVVSSP+ A+ +L++ D+ F  R  P  ++S  F +    + + P    W+ LRK+  + + +++ +     +R  +   L+ +++
Sbjct:   39 LLTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASR--PSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIK 188          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 59/232 (25.43%), Postives = 118/232 (50.86%), Query Frame = 2
Query:   47 YCPLVFTLVWVMALSFVS------RGRHKQ---LPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGP--IMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFS--IDLVNPNE--REFKDTVSGILEEAGKPNLSDHFP 694
            Y  L+   V  + +S++S       GRHK+     PGP+ +P+IG+L+++    PH+ L  LA++HG   +MS  LG    V+ S P +A+ +L +    F +R + ++   L F     ++ + P    W+ LR+I++ H+F  +++ A++  R+  +  +L  ++    +   + V +     +LN +  ++F    D+ + NE  ++ ++ V    +  G  N +DH P
Sbjct:   45 YIALLIVAVCAVLVSWLSPGGCAWAGRHKRGRVAIPGPKGWPIIGSLMDMSVGLPHRKLESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLTSPH--FANRPLKQSAQQLLFGR---AIGFAPNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDIQKEYHSKGVVRVRRHLQGAALNNIMGSVFGRRFDMSHENEEVKKLREMVDEGFQLLGAFNWADHLP 271          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 57/192 (29.69%), Postives = 98/192 (51.04%), Query Frame = 2
Query:  116 QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRR-------KKIKDL-----LAHVEDN---------CRAGKAIDVGQAAF----------NTSLNLLSNTIFS 598
            +LPPGP+  P+IGNL +      ++   L++ +GPI+ LR G V  VV+SS   A+ +L+ HDL  C R  PE + +    ++   + + P    W+ +RK+S + +F+S+KL + + +R        KK+ DL     L ++E           CR G  I++ +  F          + S +++ N+IFS
Sbjct:   27 KLPPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSR--PETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLRECEFVDEDSIDDLVHKSEDVIRNSIFS 216          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15
Identity = 54/213 (25.35%), Postives = 110/213 (51.64%), Query Frame = 2
Query:   65 TLVWVMALS-FVSRGRHK-QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSN-TIFSIDLVNPNEREFKDTVSGILEEAGKPNLSDHFP 694
            TL+ +  L  F+ R  +K  LPP P   P+IGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A+ +L+ HDL F +R   +A+  L     +  + + P    W+ ++ +  +++ T++ + + +++R +++ +++  +E    +  + ++ +       ++ S   +      +   R+ K  V  I+E  G+  + D+ P
Sbjct:   13 TLITLFLLKQFLKRTANKVNLPPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRD--VVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALGRKHSEDETARDLKKRVRQIMELLGEFPIGDYVP 223          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 53/221 (23.98%), Postives = 113/221 (51.13%), Query Frame = 2
Query:   62 FTLVWVMALSF--VSRGRHKQLPPGPRPYPVIGNLLELGAKPHKS----LAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNPNERE----FKDTVSGILEEAGKPNLSDHFP 694
            F  + ++AL +  + + +H  LPP P  +P++G+L +L +K        ++ +A+ +GP++ L+ G  +++  S+   A  +LQ +D     R  P     +  PH ++S+ W   ++ WK  RKI +  IF+ + L A ++ R +   +L+  +    + G  +++    F  +LN+L + +FS D+   +++         + G+L   G  +++ +FP
Sbjct:    7 FVSISLVALLYFLLFKPKHTNLPPSPPAWPIVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQ-PLPCFRIK-PHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFI--MTKVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMDKLIHGMLMTGGDFDVASYFP 223          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 53/213 (24.88%), Postives = 107/213 (50.23%), Query Frame = 2
Query:   65 TLVWVMALS-FVSRGRHK-QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFS-IDLVNPNEREFKDTVSGILEEAGKPNLSDHFP 694
            TL+ ++ L  F+ R   K  LPP P   PVIGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A+ +L+ HD  F +R   +A+  L     +  + + P    W+ ++ +  +++ T++ +++ +++R  ++  ++  +E    +  + ++ +       ++ S          +   R+ K  V  I+E  G+  + ++ P
Sbjct:   13 TLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRD--VVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRKHSEDETARDLKKRVRQIMELLGEFPIGEYVP 223          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 46/153 (30.07%), Postives = 83/153 (54.25%), Query Frame = 2
Query:   56 LVFTLVWVMALSFVSRGRHK-QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 511
            L   L  ++   F+ R   K  LPP P   PVIGNL +L   PH+SL  L+  +GP+M L  G+V  +VVSS   A  IL+ HDL F +R   +A+  L     +  + + P    W+ ++ +  +++ T++ + + +++R +++  ++  +E
Sbjct:   11 LTTLLTLLLLKKFLKRTAKKVNLPPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRD--VVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLE 161          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14
Identity = 41/137 (29.93%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  101 RGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVE 511
            RG+    P  P   P+IGNL +LG  PH+SL  L+  +GP+M L LG+V  +VVSS  +A+ IL+ HD  F  R  P + L     +    +A+ P    W+ ++ +  + + +++ + + + +R+++I  ++  ++
Sbjct:   26 RGKKSNTPRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASR--PRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQ 160          
BLAST of CF835137 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.112e-14
Identity = 60/221 (27.15%), Postives = 111/221 (50.23%), Query Frame = 2
Query:   56 LVFTLVWVMALSFVSRGRHKQ--LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNPNEREFKD--TVSGILEEAG----KPNLSDHFP 694
            L F ++  + L F+ + +H +  LPPGP   P IGNL +L   P ++L      +GP++ LR G V  VV+SS   A+ +L+ HDL  C R  PE   +    ++   + + P    WK +RK+S + +FT++K    + +R ++   L+  + +       +++ +  F    +++    F  +L   +E EF D  ++S +++++         SD FP
Sbjct:    5 LCFLILLPLILIFLKKLKHSKWKLPPGPPKLPFIGNLHQLQELPPRNLNHK---YGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSR--PETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRIGFGFNL---HECEFIDENSISDLVDKSEILEMTSMFSDFFP 217          
The following BLAST results are available for this feature:
BLAST of CF835137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
C71BH_ARATH8.575e-1627.75Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C99A2_ORYSJ1.120e-1530.92Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C78A4_PINRA1.120e-1525.43Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BS_ARATH1.120e-1529.69Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.120e-1525.35Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST4.256e-1523.98Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71AD_ARATH5.558e-1524.88Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH9.481e-1530.07Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH1.617e-1429.93Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH2.112e-1427.15Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835137 ID=CF835137; Name=CF835137; organism=Citrus sinensis; type=EST; length=696bp
CAAAATATCAACTTTTATTCAAAGATGGATTTGTTAATTAACTGCATACT
GTCCGCTTGTATTCACATTGGTTTGGGTGATGGCTTTAAGTTTCGTTTCC
AGAGGACGACACAAACAGCTTCCACCGGGACCGAGGCCTTATCCAGTGAT
CGGAAACCTTCTGGAGCTAGGTGCTAAACCTCACAAGTCACTGGCCAAGC
TTGCCAAGATTCATGGGCCCATAATGAGTCTAAGACTTGGCCAGGTGACC
ACAGTAGTGGTTTCTTCTCCAAGCATGGCCAAAGCCATCCTTCAAAATCA
TGATTTATCATTCTGTGATCGAATGGTCCCTGAAGCAATCTTGTCACTGC
CCTTCCCGCACCATGAATTCAGTTTGGCCTGGCTTCCAGTTTCAACAATG
TGGAAAAATCTTCGAAAAATAAGCAACATGCATATTTTCACTAGTCAGAA
ACTCGATGCCAATCAAGAGCTCCGGCGCAAGAAAATCAAAGACCTTCTTG
CTCATGTTGAAGACAATTGCCGTGCGGGTAAAGCAATAGATGTTGGCCAA
GCTGCTTTCAATACTTCACTTAATTTATTATCCAACACAATTTTTTCTAT
TGATTTGGTTAATCCCAATGAGCGAGAGTTTAAGGATACAGTTTCTGGTA
TCTTGGAAGAAGCAGGAAAGCCTAACTTGTCCGACCATTTTCCTCT
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